CI: Use Ubuntu 24.04 (#2665)

* CI: Use Ubuntu 24.04

* rtd

* matlab

* ..

* ..

Author: dweindl

.github/workflows/deploy_branch.yml

@@ -5,7 +5,7 @@ jobs:
   sdist:
     name: Deploy Python Source Distribution
 
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-24.04
 
     strategy:
       matrix:

.github/workflows/deploy_protected.yml

@@ -32,7 +32,7 @@ jobs:
     name: Deploy Docker Hub
     needs: [check-secret]
     if: needs.check-secret.outputs.secrets-defined == 'true'
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-24.04
 
     strategy:
       matrix:

.github/workflows/deploy_release.yml

@@ -8,7 +8,7 @@ jobs:
   pypi:
     name: Deploy PyPI
 
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-24.04
 
     strategy:
       matrix:
@@ -47,7 +47,7 @@ jobs:
   bioSimulatorsUpdateCliAndDockerImage:
     name: Release to BioSimulators
     needs: pypi
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-24.04
     env:
       # Owner/repository-id for the GitHub repository for the downstream command-line interface and Docker image
       DOWNSTREAM_REPOSITORY: biosimulators/Biosimulators_AMICI
@@ -72,7 +72,7 @@ jobs:
 
   dockerhub:
     name: Release to Docker Hub
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-24.04
 
     steps:
     - name: Set up Python

.github/workflows/test_benchmark_collection_models.yml

@@ -17,7 +17,7 @@ jobs:
   build:
     name: Benchmark Collection
 
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-24.04
 
     strategy:
       fail-fast: false

.github/workflows/test_doc.yml

@@ -39,7 +39,7 @@ jobs:
 
   sphinx:
     name: Test Sphinx
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-24.04
 
     strategy:
       matrix:

.github/workflows/test_install.yml

@@ -5,7 +5,7 @@ jobs:
   archive:
     name: Archive Install
 
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-24.04
 
     strategy:
       matrix:
@@ -46,7 +46,7 @@ jobs:
   sdist_ubuntu:
     name: sdist Install Ubuntu
 
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-24.04
 
     strategy:
       matrix:

.github/workflows/test_performance.yml

@@ -19,7 +19,7 @@ jobs:
   build:
     name: Performance Test
 
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-24.04
 
     strategy:
       matrix:

.github/workflows/test_pypi.yml

@@ -12,7 +12,7 @@ jobs:
       fail-fast: false
       matrix:
         python-version: ["3.10", "3.11", "3.12"]
-        os: [ubuntu-22.04, macos-latest]
+        os: [ubuntu-24.04, macos-latest]
 
     runs-on: ${{ matrix.os }}
 

.github/workflows/test_python_cplusplus.yml

@@ -11,7 +11,7 @@ on:
 jobs:
   ubuntu-cpp-python-tests:
     name: C++/Python tests Ubuntu
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-24.04
 
     strategy:
       matrix:
@@ -118,7 +118,7 @@ jobs:
 
   ubuntu-python-tests:
     name: Python tests Ubuntu
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-24.04
 
     strategy:
       matrix:
@@ -201,7 +201,7 @@ jobs:
 
   ubuntu-notebook-tests:
     name: Notebook tests Ubuntu
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-24.04
 
     strategy:
       matrix:

.github/workflows/test_python_ver_matrix.yml

@@ -16,7 +16,7 @@ jobs:
   build:
     name: Python Version Matrix
 
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-24.04
     continue-on-error: ${{ matrix.experimental }}
     env:
       AMICI_SKIP_CMAKE_TESTS: "TRUE"

.github/workflows/test_sbml_semantic_test_suite.yml

@@ -22,7 +22,7 @@ on:
 jobs:
   build:
     name: SBML Semantic Test Suite
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-24.04
 
     strategy:
       fail-fast: false

.github/workflows/test_valgrind.yml

@@ -14,7 +14,7 @@ on:
 jobs:
   valgrind_cpp:
     name: Valgrind C++
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-24.04
 
     strategy:
       matrix:
@@ -62,7 +62,7 @@ jobs:
   valgrind_python:
     name: Valgrind Python
 
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-24.04
 
     strategy:
       matrix:

.readthedocs.yml

@@ -18,7 +18,7 @@ python:
   install:
     - requirements: doc/rtd_requirements.txt
 build:
-  os: "ubuntu-22.04"
+  os: "ubuntu-24.04"
   apt_packages:
     - libatlas-base-dev
     - libhdf5-serial-dev

binder/Dockerfile

@@ -1,4 +1,4 @@
-FROM ubuntu:22.04
+FROM ubuntu:24.04
 
 # install dependencies