Initial implementation of spray capability for Manifold EOS #121

Workflow file for this run

.github/workflows/downstream.yml at dc1260e

	name: Downstream-CI

	on:
	workflow_dispatch:
	push:
	branches: [development]
	pull_request:
	branches: [development]

	concurrency:
	group: ${{ github.workflow }}-${{ github.head_ref \|\| github.ref }}
	cancel-in-progress: true

	jobs:
	PeleLMeX-FlameSheet:
	name: PeleLMeX GNU MPI Run [FlameSheet]
	runs-on: ubuntu-latest
	env:
	{CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code"}

	steps:
	- name: Checkout PelePhysics
	uses: actions/checkout@v4
	with:
	path: pelephysics-pr
	fetch-depth: 0
	ref: ${{ github.event.pull_request.head.sha \|\| github.sha }}

	- name: Clone PeleLMeX
	run: \|
	git clone --recursive --shallow-submodules --single-branch \
	https://github.com/AMReX-Combustion/PeleLMeX.git

	- name: Point PeleLMeX/Submodules/PelePhysics to this PR
	working-directory: PeleLMeX
	shell: bash
	run: \|
	cd Submodules/PelePhysics
	git fetch "$GITHUB_WORKSPACE/pelephysics-pr"
	git checkout $(git -C "$GITHUB_WORKSPACE/pelephysics-pr" rev-parse HEAD)

	echo "PelePhysics Submodule now points to:"
	git rev-parse --short HEAD

	- name: System Dependencies
	working-directory: PeleLMeX
	run: .github/workflows/dependencies/dependencies_gcc10.sh

	- name: Build
	working-directory: PeleLMeX/Exec/RegTests/FlameSheet/
	run: \|
	make TPL COMP=gnu USE_MPI=TRUE
	make -j 2 DIM=2 COMP=gnu USE_MPI=TRUE

	- name: Run
	working-directory: PeleLMeX/Exec/RegTests/FlameSheet/
	run: \|
	mpirun -n 2 ./PeleLMeX2d.gnu.MPI.ex input.2d-regt amr.max_step=2 amr.plot_int=-1 amr.check_int=-1 amrex.abort_on_unused_inputs=1 amr.n_cell=32 64

	PeleC-PMF:
	name: PeleC GNU MPI Run [PMF]
	runs-on: ubuntu-latest
	env:
	{CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code"}

	steps:
	- name: Checkout PelePhysics
	uses: actions/checkout@v4
	with:
	path: pelephysics-pr
	fetch-depth: 0
	ref: ${{ github.event.pull_request.head.sha \|\| github.sha }}

	- name: Clone PeleC
	run: \|
	git clone --recursive --shallow-submodules --single-branch \
	https://github.com/AMReX-Combustion/PeleC.git

	- name: Point PeleC/Submodules/PelePhysics to this PR
	working-directory: PeleC
	shell: bash
	run: \|
	cd Submodules/PelePhysics
	git fetch "$GITHUB_WORKSPACE/pelephysics-pr"
	git checkout $(git -C "$GITHUB_WORKSPACE/pelephysics-pr" rev-parse HEAD)

	echo "PelePhysics Submodule now points to:"
	git rev-parse --short HEAD

	- name: System Dependencies
	working-directory: PeleC
	run: \|
	set -eu -o pipefail

	sudo add-apt-repository ppa:ubuntu-toolchain-r/test
	sudo apt-get update

	sudo apt-get install -y --no-install-recommends \
	build-essential \
	libopenmpi-dev \
	openmpi-bin

	- name: Build
	working-directory: PeleC/Exec/RegTests/PMF/
	run: \|
	make TPL COMP=gnu USE_MPI=TRUE
	make -j 2 DIM=3 COMP=gnu USE_MPI=TRUE

	- name: Run
	working-directory: PeleC/Exec/RegTests/PMF/
	run: \|
	mpirun -n 2 ./PeleC3d.gnu.MPI.ex example.inp max_step=2 amr.plot_int=-1 amr.check_int=-1 amrex.abort_on_unused_inputs=0 amr.n_cell=8 8 128

	PeleLMeX-clang-tidy:
	name: PeleLMeX clang-tidy
	needs: [PeleLMeX-FlameSheet, PeleC-PMF]
	runs-on: ubuntu-24.04

	steps:
	- name: Checkout PelePhysics
	uses: actions/checkout@v4
	with:
	path: pelephysics-pr
	fetch-depth: 0
	ref: ${{ github.event.pull_request.head.sha \|\| github.sha }}

	- name: Clone PeleLMeX
	run: \|
	git clone --recursive --shallow-submodules --single-branch \
	https://github.com/AMReX-Combustion/PeleLMeX.git

	- name: Point PeleLMeX/Submodules/PelePhysics to this PR
	working-directory: PeleLMeX
	shell: bash
	run: \|
	cd Submodules/PelePhysics
	git fetch "$GITHUB_WORKSPACE/pelephysics-pr"
	git checkout $(git -C "$GITHUB_WORKSPACE/pelephysics-pr" rev-parse HEAD)

	echo "PelePhysics Submodule now points to:"
	git rev-parse --short HEAD

	- name: Setup
	run: \|
	echo "NPROCS=$(nproc)" >> $GITHUB_ENV
	echo "CCACHE_COMPRESS=1" >> $GITHUB_ENV
	echo "CCACHE_COMPRESSLEVEL=10" >> $GITHUB_ENV
	echo "CCACHE_LOGFILE=${{github.workspace}}/ccache.log.txt" >> $GITHUB_ENV
	echo "CCACHE_EXTRAFILES=${{github.workspace}}/PeleLMeX/.clang-tidy" >> $GITHUB_ENV
	echo "CCACHE_MAXSIZE=100M" >> $GITHUB_ENV
	echo "CTCACHE_DIR=~/.cache/ctcache" >> $GITHUB_ENV

	- name: Install Ccache
	run: \|
	wget https://github.com/ccache/ccache/releases/download/v4.8/ccache-4.8-linux-x86_64.tar.xz
	sudo curl https://raw.githubusercontent.com/matus-chochlik/ctcache/7fd516e91c17779cbc6fc18bd119313d9532dd90/clang-tidy-cache -Lo /usr/bin/clang-tidy-cache
	tar xvf ccache-4.8-linux-x86_64.tar.xz
	sudo cp -f ccache-4.8-linux-x86_64/ccache /usr/local/bin/
	sudo chmod +x /usr/bin/clang-tidy-cache
	mkdir -p ~/.cache/ctcache

	- name: Set Up Ccache
	uses: actions/cache@v4
	with:
	path: ~/.cache
	key: ccache-${{ github.workflow }}-${{ github.job }}-git-${{ github.sha }}
	restore-keys: \|
	ccache-${{ github.workflow }}-${{ github.job }}-git-

	- name: Configure
	working-directory: PeleLMeX
	run: \|
	cmake -B"${{ github.workspace }}/build-clang-tidy-lmex" \
	-DCMAKE_BUILD_TYPE:STRING=Release \
	-DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \
	-DCMAKE_CXX_COMPILER:STRING=clang++ \
	-DCMAKE_C_COMPILER:STRING=clang \
	-DPELE_ENABLE_EB:BOOL=OFF \
	-DPELE_ENABLE_MPI:BOOL=OFF \
	-DPELE_ENABLE_FCOMPARE_FOR_TESTS:BOOL=OFF \
	-DPELE_ENABLE_CLANG_TIDY:BOOL=ON \
	-DCMAKE_CXX_COMPILER_LAUNCHER:STRING=ccache \
	${{ github.workspace }}/PeleLMeX

	- name: Check
	working-directory: ${{ github.workspace }}/build-clang-tidy-lmex
	run: \|
	cmake --build . --parallel ${{ env.NPROCS }} 2>&1 \| tee -a clang-tidy-full-report.txt
	egrep "Warning:\|Error:\|warning:\|error:" clang-tidy-full-report.txt \
	\| egrep -v "Submodules/amrex\|Submodules/sundials\|Submodules/AMReX-Hydro" \
	\| egrep -v "ld: warning:" \| sort \| uniq \
	\| awk 'BEGIN{i=0}{print $0}{i++}END{print "Warnings: "i}' > clang-tidy-warnings.txt

	- name: Ccache Report
	run: \|
	ls ~/.cache
	ls ~/.cache/ccache
	du -hs ~/.cache/ccache
	ls ~/.cache/ctcache
	du -hs ~/.cache/ctcache
	ccache -s

	- name: Full report
	working-directory: ${{ github.workspace }}/build-clang-tidy-lmex
	run: cat clang-tidy-full-report.txt

	- name: Short report
	working-directory: ${{ github.workspace }}/build-clang-tidy-lmex
	run: \|
	echo "::add-matcher::${{ github.workspace }}/PeleLMeX/.github/problem-matchers/gcc.json"
	cat clang-tidy-warnings.txt
	export return=$(tail -n 1 clang-tidy-warnings.txt \| awk '{print $2}')
	exit ${return}

	PeleC-clang-tidy:
	name: PeleC clang-tidy
	needs: [PeleLMeX-FlameSheet, PeleC-PMF]
	runs-on: ubuntu-24.04

	steps:
	- name: Checkout PelePhysics
	uses: actions/checkout@v4
	with:
	path: pelephysics-pr
	fetch-depth: 0
	ref: ${{ github.event.pull_request.head.sha \|\| github.sha }}

	- name: Clone PeleC
	run: \|
	git clone --recursive --shallow-submodules --single-branch \
	https://github.com/AMReX-Combustion/PeleC

	- name: Point PeleC/Submodules/PelePhysics to this PR
	working-directory: PeleC
	shell: bash
	run: \|
	cd Submodules/PelePhysics
	git fetch "$GITHUB_WORKSPACE/pelephysics-pr"
	git checkout $(git -C "$GITHUB_WORKSPACE/pelephysics-pr" rev-parse HEAD)

	echo "PelePhysics Submodule now points to:"
	git rev-parse --short HEAD

	- name: Setup
	run: \|
	echo "NPROCS=$(nproc)" >> $GITHUB_ENV
	echo "CCACHE_COMPRESS=1" >> $GITHUB_ENV
	echo "CCACHE_COMPRESSLEVEL=10" >> $GITHUB_ENV
	echo "CCACHE_LOGFILE=${{github.workspace}}/ccache.log.txt" >> $GITHUB_ENV
	echo "CCACHE_EXTRAFILES=${{github.workspace}}/PeleC/.clang-tidy" >> $GITHUB_ENV
	echo "CCACHE_MAXSIZE=100M" >> $GITHUB_ENV
	echo "CTCACHE_DIR=~/.cache/ctcache" >> $GITHUB_ENV

	- name: Install Ccache
	run: \|
	wget https://github.com/ccache/ccache/releases/download/v4.8/ccache-4.8-linux-x86_64.tar.xz
	sudo curl https://raw.githubusercontent.com/matus-chochlik/ctcache/7fd516e91c17779cbc6fc18bd119313d9532dd90/clang-tidy-cache -Lo /usr/bin/clang-tidy-cache
	tar xvf ccache-4.8-linux-x86_64.tar.xz
	sudo cp -f ccache-4.8-linux-x86_64/ccache /usr/local/bin/
	sudo chmod +x /usr/bin/clang-tidy-cache
	mkdir -p ~/.cache/ctcache

	- name: Set Up Ccache
	uses: actions/cache@v4
	with:
	path: ~/.cache
	key: ccache-${{github.workflow}}-${{github.job}}-git-${{github.sha}}
	restore-keys: \|
	ccache-${{github.workflow}}-${{github.job}}-git-

	- name: Configure
	working-directory: PeleC
	run: \|
	cmake -B"${{ github.workspace }}/build-clang-tidy-c" \
	-DCMAKE_BUILD_TYPE:STRING=Release \
	-DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \
	-DCMAKE_CXX_COMPILER:STRING=clang++ \
	-DCMAKE_C_COMPILER:STRING=clang \
	-DPELE_ENABLE_MPI:BOOL=OFF \
	-DPELE_ENABLE_FCOMPARE_FOR_TESTS:BOOL=OFF \
	-DPELE_ENABLE_MASA:BOOL=OFF \
	-DPELE_ENABLE_CLANG_TIDY:BOOL=ON \
	-DPELE_EXCLUDE_BUILD_IN_CI:BOOL=ON \
	-DCMAKE_CXX_COMPILER_LAUNCHER:STRING=ccache \
	${{github.workspace}}/PeleC

	- name: Check
	working-directory: ${{ github.workspace }}/build-clang-tidy-c
	run: \|
	cmake --build . --parallel ${{ env.NPROCS }} 2>&1 \| tee -a clang-tidy-full-report.txt
	egrep "Warning:\|Error:\|warning:\|error:" clang-tidy-full-report.txt \
	\| egrep -v "Submodules/amrex\|Submodules/sundials\|Submodules/AMReX-Hydro" \
	\| egrep -v "ld: warning:" \| sort \| uniq \
	\| awk 'BEGIN{i=0}{print $0}{i++}END{print "Warnings: "i}' > clang-tidy-warnings.txt

	- name: Ccache Report
	run: \|
	ls ~/.cache
	ls ~/.cache/ccache
	du -hs ~/.cache/ccache
	ls ~/.cache/ctcache
	du -hs ~/.cache/ctcache
	ccache -s

	- name: Full report
	working-directory: ${{ github.workspace }}/build-clang-tidy-c
	run: cat clang-tidy-full-report.txt

	- name: Short report
	working-directory: ${{ github.workspace }}/build-clang-tidy-c
	run: \|
	echo "::add-matcher::${{ github.workspace }}/PeleC/.github/problem-matchers/gcc.json"
	cat clang-tidy-warnings.txt
	export return=$(tail -n 1 clang-tidy-warnings.txt \| awk '{print $2}')
	exit ${return}

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Initial implementation of spray capability for Manifold EOS #121

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Initial implementation of spray capability for Manifold EOS #121

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