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@AMSSwanglab

The Wang lab at AMSS

Optimization and Computational Systems Biology

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  1. vPECA vPECA Public

    vPECA is a Variants interpretation method by Paired Expression and Chromatin Accessibility data which can identify active and active selected regulatory elements and their gene regulatory network.

    MATLAB 8 2

  2. SpecVar SpecVar Public

    SpecVar is a convenient tool for estimating interpretable genetic correlation of human complex traits and annotating the SNPs with context specific regulatory networks

    Shell 7

  3. hReg-CNCC hReg-CNCC Public

    hReg-CNCC is a high-quality Regulatory network of Cranial Neural Crest Cell (CNCC), built by consensus optimization.

    Python 6

  4. scTIM scTIM Public

    scTIM is a convenient tool for cell-type indicative marker detection based on single cell RNA-seq data

    Python 5

  5. RE-GOA RE-GOA Public

    A tool for non-coding genomic regions function enrichment analysis based on Regulatory Elements Gene Ontology Annotation (RE-GOA)

    Python 5 1

  6. ClusterMatch ClusterMatch Public

    R 3

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