diff --git a/poetry.lock b/poetry.lock index c08ff76..7f98aca 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,27 +1,26 @@ [[package]] -category = "dev" -description = "Disable App Nap on OS X 10.9" -marker = "sys_platform == \"darwin\"" name = "appnope" +version = "0.1.0" +description = "Disable App Nap on OS X 10.9" +category = "dev" optional = false python-versions = "*" -version = "0.1.0" [[package]] -category = "main" -description = "Python command-line parsing library" name = "argparse" +version = "1.4.0" +description = "Python command-line parsing library" +category = "main" optional = false python-versions = "*" -version = "1.4.0" [[package]] -category = "main" -description = "Exploratory analysis of Bayesian models" name = "arviz" +version = "0.9.0" +description = "Exploratory analysis of Bayesian models" +category = "main" optional = false python-versions = "*" -version = "0.9.0" [package.dependencies] matplotlib = ">=3.0" @@ -33,45 +32,44 @@ scipy = ">=0.19" xarray = ">=0.11" [package.extras] -all = ["numba", "bokeh (>=1.4.0)"] +all = ["bokeh (>=1.4.0)", "numba"] [[package]] -category = "main" -description = "Atomic file writes." -marker = "sys_platform == \"win32\"" name = "atomicwrites" +version = "1.4.0" +description = "Atomic file writes." +category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "1.4.0" [[package]] -category = "main" -description = "Classes Without Boilerplate" name = "attrs" +version = "20.1.0" +description = "Classes Without Boilerplate" +category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "20.1.0" [package.extras] -dev = ["coverage (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.interface", "sphinx", "sphinx-rtd-theme", "pre-commit"] +dev = ["coverage[toml] (>=5.0.2)", "hypothesis", "pre-commit", "pympler", "pytest (>=4.3.0)", "six", "sphinx", "sphinx-rtd-theme", "zope.interface"] docs = ["sphinx", "sphinx-rtd-theme", "zope.interface"] -tests = ["coverage (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.interface"] +tests = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.interface"] [[package]] -category = "dev" -description = "Specifications for callback functions passed in to an API" name = "backcall" +version = "0.2.0" +description = "Specifications for callback functions passed in to an API" +category = "dev" optional = false python-versions = "*" -version = "0.2.0" [[package]] -category = "main" -description = "Bayesian Optimization package" name = "bayesian-optimization" +version = "1.2.0" +description = "Bayesian Optimization package" +category = "main" optional = false python-versions = "*" -version = "1.2.0" [package.dependencies] numpy = ">=1.9.0" @@ -79,47 +77,47 @@ scikit-learn = ">=0.18.0" scipy = ">=0.14.0" [[package]] -category = "main" -description = "Python package for providing Mozilla's CA Bundle." name = "certifi" +version = "2020.6.20" +description = "Python package for providing Mozilla's CA Bundle." +category = "main" optional = false python-versions = "*" -version = "2020.6.20" [[package]] -category = "main" -description = "Time-handling functionality from netcdf4-python" name = "cftime" +version = "1.2.1" +description = "Time-handling functionality from netcdf4-python" +category = "main" optional = false python-versions = "*" -version = "1.2.1" [package.dependencies] numpy = "*" [[package]] -category = "main" -description = "Composable command line interface toolkit" name = "click" +version = "7.1.2" +description = "Composable command line interface toolkit" +category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "7.1.2" [[package]] -category = "main" -description = "Extended pickling support for Python objects" name = "cloudpickle" +version = "1.6.0" +description = "Extended pickling support for Python objects" +category = "main" optional = false python-versions = ">=3.5" -version = "1.6.0" [[package]] -category = "main" -description = "CMA-ES, Covariance Matrix Adaptation Evolution Strategy for non-linear numerical optimization in Python" name = "cma" +version = "3.0.3" +description = "CMA-ES, Covariance Matrix Adaptation Evolution Strategy for non-linear numerical optimization in Python" +category = "main" optional = false python-versions = "*" -version = "3.0.3" [package.dependencies] numpy = "*" @@ -128,21 +126,20 @@ numpy = "*" plotting = ["matplotlib"] [[package]] -category = "main" -description = "Cross-platform colored terminal text." -marker = "sys_platform == \"win32\"" name = "colorama" +version = "0.4.3" +description = "Cross-platform colored terminal text." +category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "0.4.3" [[package]] -category = "main" -description = "Colored terminal output for Python's logging module" name = "coloredlogs" +version = "14.0" +description = "Colored terminal output for Python's logging module" +category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "14.0" [package.dependencies] humanfriendly = ">=7.1" @@ -151,12 +148,12 @@ humanfriendly = ">=7.1" cron = ["capturer (>=2.4)"] [[package]] -category = "main" -description = "Creation and manipulation of parameter configuration spaces for automated algorithm configuration and hyperparameter tuning." name = "configspace" +version = "0.4.13" +description = "Creation and manipulation of parameter configuration spaces for automated algorithm configuration and hyperparameter tuning." +category = "main" optional = true python-versions = ">=3.6.*" -version = "0.4.13" [package.dependencies] cython = "*" @@ -164,72 +161,72 @@ numpy = "*" pyparsing = "*" [[package]] -category = "main" -description = "Composable style cycles" name = "cycler" +version = "0.10.0" +description = "Composable style cycles" +category = "main" optional = false python-versions = "*" -version = "0.10.0" [package.dependencies] six = "*" [[package]] -category = "main" -description = "The Cython compiler for writing C extensions for the Python language." name = "cython" +version = "0.29.21" +description = "The Cython compiler for writing C extensions for the Python language." +category = "main" optional = true python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*" -version = "0.29.21" [[package]] -category = "main" -description = "Decorators for Humans" name = "decorator" +version = "4.4.2" +description = "Decorators for Humans" +category = "main" optional = false python-versions = ">=2.6, !=3.0.*, !=3.1.*" -version = "4.4.2" [[package]] -category = "main" -description = "Python @deprecated decorator to deprecate old python classes, functions or methods." name = "deprecated" +version = "1.2.10" +description = "Python @deprecated decorator to deprecate old python classes, functions or methods." +category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "1.2.10" [package.dependencies] wrapt = ">=1.10,<2" [package.extras] -dev = ["tox", "bumpversion (<1)", "sphinx (<2)", "PyTest (<5)", "PyTest-Cov (<2.6)", "pytest", "pytest-cov"] +dev = ["PyTest", "PyTest (<5)", "PyTest-Cov", "PyTest-Cov (<2.6)", "bumpversion (<1)", "sphinx (<2)", "tox"] [[package]] -category = "main" -description = "Docutils -- Python Documentation Utilities" name = "docutils" +version = "0.16" +description = "Docutils -- Python Documentation Utilities" +category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "0.16" [[package]] -category = "main" -description = "A nested progress with plotting options for fastai" name = "fastprogress" +version = "1.0.0" +description = "A nested progress with plotting options for fastai" +category = "main" optional = false python-versions = ">=3.6" -version = "1.0.0" [package.dependencies] numpy = "*" [[package]] -category = "main" -description = "A controls-oriented engineering wake model." name = "floris" +version = "2.1.1" +description = "A controls-oriented engineering wake model." +category = "main" optional = false python-versions = ">=3.6.0" -version = "2.1.1" [package.dependencies] coloredlogs = ">=10.0" @@ -243,25 +240,25 @@ seaborn = ">=0.9" sklearn = ">=0.0" [package.extras] -develop = ["isort", "pre-commit", "black", "flake8"] -docs = ["sphinxcontrib-napoleon", "sphinx", "readthedocs-sphinx-ext"] -wind_tool_kit = ["h5pyd (>=0.3)"] +develop = ["black", "flake8", "isort", "pre-commit"] +docs = ["Sphinx", "readthedocs-sphinx-ext", "sphinxcontrib-napoleon"] +wind-tool-kit = ["h5pyd (>=0.3)"] [[package]] -category = "main" -description = "Clean single-source support for Python 3 and 2" name = "future" +version = "0.18.2" +description = "Clean single-source support for Python 3 and 2" +category = "main" optional = false python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*" -version = "0.18.2" [[package]] -category = "main" -description = "The Gaussian Process Toolbox" name = "gpy" +version = "1.9.9" +description = "The Gaussian Process Toolbox" +category = "main" optional = false python-versions = "*" -version = "1.9.9" [package.dependencies] numpy = ">=1.7" @@ -271,40 +268,40 @@ six = "*" [package.extras] docs = ["sphinx"] -notebook = ["jupyter-client (>=4.0.6)", "ipywidgets (>=4.0.3)", "ipykernel (>=4.1.0)", "notebook (>=4.0.5)"] -optional = ["mpi4py", "ipython (>=4.0.0)"] +notebook = ["ipykernel (>=4.1.0)", "ipywidgets (>=4.0.3)", "jupyter-client (>=4.0.6)", "notebook (>=4.0.5)"] +optional = ["ipython (>=4.0.0)", "mpi4py"] plotting = ["matplotlib (>=3.0)", "plotly (>=1.8.6)"] [[package]] -category = "main" -description = "Read and write HDF5 files from Python" name = "h5py" +version = "2.10.0" +description = "Read and write HDF5 files from Python" +category = "main" optional = false python-versions = "*" -version = "2.10.0" [package.dependencies] numpy = ">=1.7" six = "*" [[package]] -category = "main" -description = "Human friendly output for text interfaces using Python" name = "humanfriendly" +version = "8.2" +description = "Human friendly output for text interfaces using Python" +category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "8.2" [package.dependencies] -pyreadline = "*" +pyreadline = {version = "*", markers = "sys_platform == \"win32\""} [[package]] -category = "main" -description = "Distributed Asynchronous Hyperparameter Optimization" name = "hyperopt" +version = "0.2.4" +description = "Distributed Asynchronous Hyperparameter Optimization" +category = "main" optional = false python-versions = "*" -version = "0.2.4" [package.dependencies] cloudpickle = "*" @@ -317,49 +314,48 @@ tqdm = "*" [package.extras] atpe = ["lightgbm", "scikit-learn"] -dev = ["black", "pre-commit", "nose", "pytest"] +dev = ["black", "nose", "pre-commit", "pytest"] mongotrials = ["pymongo"] sparktrials = ["pyspark"] [[package]] -category = "main" -description = "Read metadata from Python packages" -marker = "python_version < \"3.8\"" name = "importlib-metadata" +version = "1.7.0" +description = "Read metadata from Python packages" +category = "main" optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7" -version = "1.7.0" [package.dependencies] zipp = ">=0.5" [package.extras] -docs = ["sphinx", "rst.linker"] -testing = ["packaging", "pep517", "importlib-resources (>=1.3)"] +docs = ["rst.linker", "sphinx"] +testing = ["importlib-resources (>=1.3)", "packaging", "pep517"] [[package]] -category = "main" -description = "iniconfig: brain-dead simple config-ini parsing" name = "iniconfig" +version = "1.0.1" +description = "iniconfig: brain-dead simple config-ini parsing" +category = "main" optional = false python-versions = "*" -version = "1.0.1" [[package]] -category = "dev" -description = "IPython: Productive Interactive Computing" name = "ipython" +version = "7.18.1" +description = "IPython: Productive Interactive Computing" +category = "dev" optional = false python-versions = ">=3.7" -version = "7.18.1" [package.dependencies] -appnope = "*" +appnope = {version = "*", markers = "sys_platform == \"darwin\""} backcall = "*" -colorama = "*" +colorama = {version = "*", markers = "sys_platform == \"win32\""} decorator = "*" jedi = ">=0.10" -pexpect = ">4.3" +pexpect = {version = ">4.3", markers = "sys_platform != \"win32\""} pickleshare = "*" prompt-toolkit = ">=2.0.0,<3.0.0 || >3.0.0,<3.0.1 || >3.0.1,<3.1.0" pygments = "*" @@ -372,68 +368,68 @@ doc = ["Sphinx (>=1.3)"] kernel = ["ipykernel"] nbconvert = ["nbconvert"] nbformat = ["nbformat"] -notebook = ["notebook", "ipywidgets"] +notebook = ["ipywidgets", "notebook"] parallel = ["ipyparallel"] qtconsole = ["qtconsole"] -test = ["nose (>=0.10.1)", "requests", "testpath", "pygments", "nbformat", "ipykernel", "numpy (>=1.14)"] +test = ["ipykernel", "nbformat", "nose (>=0.10.1)", "numpy (>=1.14)", "pygments", "requests", "testpath"] [[package]] -category = "dev" -description = "Vestigial utilities from IPython" name = "ipython-genutils" +version = "0.2.0" +description = "Vestigial utilities from IPython" +category = "dev" optional = false python-versions = "*" -version = "0.2.0" [[package]] -category = "dev" -description = "An autocompletion tool for Python that can be used for text editors." name = "jedi" +version = "0.17.2" +description = "An autocompletion tool for Python that can be used for text editors." +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "0.17.2" [package.dependencies] parso = ">=0.7.0,<0.8.0" [package.extras] -qa = ["flake8 (3.7.9)"] +qa = ["flake8 (==3.7.9)"] testing = ["Django (<3.1)", "colorama", "docopt", "pytest (>=3.9.0,<5.0.0)"] [[package]] -category = "main" -description = "Lightweight pipelining: using Python functions as pipeline jobs." name = "joblib" +version = "0.16.0" +description = "Lightweight pipelining: using Python functions as pipeline jobs." +category = "main" optional = false python-versions = ">=3.6" -version = "0.16.0" [[package]] -category = "main" -description = "Julia/Python bridge with IPython support." name = "julia" +version = "0.5.4" +description = "Julia/Python bridge with IPython support." +category = "main" optional = true python-versions = "*" -version = "0.5.4" [package.extras] -test = ["numpy", "ipython", "pytest (>=4.4)", "mock"] +test = ["ipython", "mock", "numpy", "pytest (>=4.4)"] [[package]] -category = "main" -description = "A fast implementation of the Cassowary constraint solver" name = "kiwisolver" +version = "1.2.0" +description = "A fast implementation of the Cassowary constraint solver" +category = "main" optional = false python-versions = ">=3.6" -version = "1.2.0" [[package]] -category = "main" -description = "A module for lazy loading of Python modules" name = "lazy-import" +version = "0.2.2" +description = "A module for lazy loading of Python modules" +category = "main" optional = true python-versions = "*" -version = "0.2.2" [package.dependencies] six = "*" @@ -442,20 +438,20 @@ six = "*" test = ["pytest", "pytest-xdist"] [[package]] -category = "main" -description = "lightweight wrapper around basic LLVM functionality" name = "llvmlite" +version = "0.32.1" +description = "lightweight wrapper around basic LLVM functionality" +category = "main" optional = false python-versions = "*" -version = "0.32.1" [[package]] -category = "main" -description = "Python plotting package" name = "matplotlib" +version = "3.3.1" +description = "Python plotting package" +category = "main" optional = false python-versions = ">=3.6" -version = "3.3.1" [package.dependencies] certifi = ">=2020.06.20" @@ -467,38 +463,38 @@ pyparsing = ">=2.0.3,<2.0.4 || >2.0.4,<2.1.2 || >2.1.2,<2.1.6 || >2.1.6" python-dateutil = ">=2.1" [[package]] -category = "main" -description = "More routines for operating on iterables, beyond itertools" name = "more-itertools" +version = "8.5.0" +description = "More routines for operating on iterables, beyond itertools" +category = "main" optional = false python-versions = ">=3.5" -version = "8.5.0" [[package]] -category = "main" -description = "Provides an object-oriented python interface to the netCDF version 4 library." name = "netcdf4" +version = "1.5.4" +description = "Provides an object-oriented python interface to the netCDF version 4 library." +category = "main" optional = false python-versions = "*" -version = "1.5.4" [package.dependencies] cftime = "*" numpy = ">=1.9" [[package]] -category = "main" -description = "Python package for creating and manipulating graphs and networks" name = "networkx" +version = "2.5" +description = "Python package for creating and manipulating graphs and networks" +category = "main" optional = false python-versions = ">=3.6" -version = "2.5" [package.dependencies] decorator = ">=4.3.0" [package.extras] -all = ["numpy", "scipy", "pandas", "matplotlib", "pygraphviz", "pydot", "pyyaml", "lxml", "pytest"] +all = ["lxml", "matplotlib", "numpy", "pandas", "pydot", "pygraphviz", "pytest", "pyyaml", "scipy"] gdal = ["gdal"] lxml = ["lxml"] matplotlib = ["matplotlib"] @@ -511,12 +507,12 @@ pyyaml = ["pyyaml"] scipy = ["scipy"] [[package]] -category = "main" -description = "compiling Python code using LLVM" name = "numba" +version = "0.49.1" +description = "compiling Python code using LLVM" +category = "main" optional = false python-versions = ">=3.6" -version = "0.49.1" [package.dependencies] llvmlite = ">=0.31.0.dev0,<=0.33.0.dev0" @@ -524,32 +520,32 @@ numpy = ">=1.15" setuptools = "*" [[package]] -category = "main" -description = "NumPy is the fundamental package for array computing with Python." name = "numpy" +version = "1.19.1" +description = "NumPy is the fundamental package for array computing with Python." +category = "main" optional = false python-versions = ">=3.6" -version = "1.19.1" [[package]] -category = "main" -description = "Core utilities for Python packages" name = "packaging" +version = "20.4" +description = "Core utilities for Python packages" +category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "20.4" [package.dependencies] pyparsing = ">=2.0.2" six = "*" [[package]] -category = "main" -description = "Powerful data structures for data analysis, time series, and statistics" name = "pandas" +version = "1.1.1" +description = "Powerful data structures for data analysis, time series, and statistics" +category = "main" optional = false python-versions = ">=3.6.1" -version = "1.1.1" [package.dependencies] numpy = ">=1.15.4" @@ -557,15 +553,15 @@ python-dateutil = ">=2.7.3" pytz = ">=2017.2" [package.extras] -test = ["pytest (>=4.0.2)", "pytest-xdist", "hypothesis (>=3.58)"] +test = ["hypothesis (>=3.58)", "pytest (>=4.0.2)", "pytest-xdist"] [[package]] -category = "main" +name = "paramz" +version = "0.9.5" description = "The Parameterization Framework" -name = "paramz" +category = "main" optional = false python-versions = "*" -version = "0.9.5" [package.dependencies] decorator = ">=4.0.10" @@ -575,130 +571,126 @@ six = "*" [package.extras] docs = ["sphinx"] -notebook = ["jupyter_client (>=4.0.6)", "ipywidgets (>=4.0.3)", "ipykernel (>=4.1.0)", "notebook (>=4.0.5)"] +notebook = ["ipykernel (>=4.1.0)", "ipywidgets (>=4.0.3)", "jupyter_client (>=4.0.6)", "notebook (>=4.0.5)"] optimization = ["climin"] [[package]] -category = "dev" -description = "A Python Parser" name = "parso" +version = "0.7.1" +description = "A Python Parser" +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "0.7.1" [package.extras] testing = ["docopt", "pytest (>=3.0.7)"] [[package]] -category = "main" -description = "A Python package for describing statistical models and for building design matrices." name = "patsy" +version = "0.5.1" +description = "A Python package for describing statistical models and for building design matrices." +category = "main" optional = false python-versions = "*" -version = "0.5.1" [package.dependencies] numpy = ">=1.4" six = "*" [[package]] -category = "dev" -description = "Pexpect allows easy control of interactive console applications." -marker = "sys_platform != \"win32\"" name = "pexpect" +version = "4.8.0" +description = "Pexpect allows easy control of interactive console applications." +category = "dev" optional = false python-versions = "*" -version = "4.8.0" [package.dependencies] ptyprocess = ">=0.5" [[package]] -category = "dev" -description = "Tiny 'shelve'-like database with concurrency support" name = "pickleshare" +version = "0.7.5" +description = "Tiny 'shelve'-like database with concurrency support" +category = "dev" optional = false python-versions = "*" -version = "0.7.5" [[package]] -category = "main" -description = "Python Imaging Library (Fork)" name = "pillow" +version = "7.2.0" +description = "Python Imaging Library (Fork)" +category = "main" optional = false python-versions = ">=3.5" -version = "7.2.0" [[package]] -category = "main" -description = "plugin and hook calling mechanisms for python" name = "pluggy" +version = "0.13.1" +description = "plugin and hook calling mechanisms for python" +category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "0.13.1" [package.dependencies] -[package.dependencies.importlib-metadata] -python = "<3.8" -version = ">=0.12" +importlib-metadata = {version = ">=0.12", markers = "python_version < \"3.8\""} [package.extras] dev = ["pre-commit", "tox"] [[package]] -category = "dev" -description = "Library for building powerful interactive command lines in Python" name = "prompt-toolkit" +version = "3.0.7" +description = "Library for building powerful interactive command lines in Python" +category = "dev" optional = false python-versions = ">=3.6.1" -version = "3.0.7" [package.dependencies] wcwidth = "*" [[package]] -category = "main" -description = "Cross-platform lib for process and system monitoring in Python." name = "psutil" +version = "5.7.2" +description = "Cross-platform lib for process and system monitoring in Python." +category = "main" optional = false python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "5.7.2" [package.extras] -test = ["ipaddress", "mock", "unittest2", "enum34", "pywin32", "wmi"] +test = ["enum34", "ipaddress", "mock", "pywin32", "unittest2", "wmi"] [[package]] -category = "dev" -description = "Run a subprocess in a pseudo terminal" -marker = "sys_platform != \"win32\"" name = "ptyprocess" +version = "0.6.0" +description = "Run a subprocess in a pseudo terminal" +category = "dev" optional = false python-versions = "*" -version = "0.6.0" [[package]] -category = "main" -description = "library with cross-python path, ini-parsing, io, code, log facilities" name = "py" +version = "1.9.0" +description = "library with cross-python path, ini-parsing, io, code, log facilities" +category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "1.9.0" [[package]] -category = "dev" -description = "Pygments is a syntax highlighting package written in Python." name = "pygments" +version = "2.6.1" +description = "Pygments is a syntax highlighting package written in Python." +category = "dev" optional = false python-versions = ">=3.5" -version = "2.6.1" [[package]] -category = "main" -description = "Bayesian Optimization tools in Python" name = "pygpgo" +version = "0.4.0.dev1" +description = "Bayesian Optimization tools in Python" +category = "main" optional = false python-versions = "*" -version = "0.4.0.dev1" [package.dependencies] joblib = "*" @@ -709,12 +701,12 @@ scipy = "*" theano = "*" [[package]] -category = "main" -description = "Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Theano" name = "pymc3" +version = "3.9.3" +description = "Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Theano" +category = "main" optional = false python-versions = ">=3.6" -version = "3.9.3" [package.dependencies] arviz = ">=0.9.0" @@ -728,12 +720,12 @@ theano = ">=1.0.5" typing-extensions = ">=3.7.4" [[package]] -category = "main" -description = "A small Python library to limit the resources used by a function by executing it inside a subprocess." name = "pynisher" +version = "0.5.0" +description = "A small Python library to limit the resources used by a function by executing it inside a subprocess." +category = "main" optional = false python-versions = "*" -version = "0.5.0" [package.dependencies] docutils = ">=0.3" @@ -741,50 +733,50 @@ psutil = "*" setuptools = "*" [[package]] -category = "main" -description = "Python parsing module" name = "pyparsing" +version = "2.4.7" +description = "Python parsing module" +category = "main" optional = false python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*" -version = "2.4.7" [[package]] -category = "main" -description = "Python interface to PROJ (cartographic projections and coordinate transformations library)" name = "pyproj" +version = "2.6.1.post1" +description = "Python interface to PROJ (cartographic projections and coordinate transformations library)" +category = "main" optional = false python-versions = ">=3.5" -version = "2.6.1.post1" [[package]] -category = "main" -description = "A python implmementation of GNU readline." -marker = "sys_platform == \"win32\"" name = "pyreadline" +version = "2.1" +description = "A python implmementation of GNU readline." +category = "main" optional = false python-versions = "*" -version = "2.1" [[package]] -category = "main" -description = "" name = "pyrfr" +version = "0.8.0" +description = "" +category = "main" optional = true python-versions = ">=3" -version = "0.8.0" [[package]] -category = "main" -description = "pytest: simple powerful testing with Python" name = "pytest" +version = "6.0.1" +description = "pytest: simple powerful testing with Python" +category = "main" optional = false python-versions = ">=3.5" -version = "6.0.1" [package.dependencies] -atomicwrites = ">=1.0" +atomicwrites = {version = ">=1.0", markers = "sys_platform == \"win32\""} attrs = ">=17.4.0" -colorama = "*" +colorama = {version = "*", markers = "sys_platform == \"win32\""} +importlib-metadata = {version = ">=0.12", markers = "python_version < \"3.8\""} iniconfig = "*" more-itertools = ">=4.0.0" packaging = "*" @@ -792,40 +784,36 @@ pluggy = ">=0.12,<1.0" py = ">=1.8.2" toml = "*" -[package.dependencies.importlib-metadata] -python = "<3.8" -version = ">=0.12" - [package.extras] -checkqa_mypy = ["mypy (0.780)"] +checkqa-mypy = ["mypy (==0.780)"] testing = ["argcomplete", "hypothesis (>=3.56)", "mock", "nose", "requests", "xmlschema"] [[package]] -category = "main" -description = "Extensions to the standard Python datetime module" name = "python-dateutil" +version = "2.8.1" +description = "Extensions to the standard Python datetime module" +category = "main" optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7" -version = "2.8.1" [package.dependencies] six = ">=1.5" [[package]] -category = "main" -description = "World timezone definitions, modern and historical" name = "pytz" +version = "2020.1" +description = "World timezone definitions, modern and historical" +category = "main" optional = false python-versions = "*" -version = "2020.1" [[package]] -category = "main" -description = "A set of python modules for machine learning and data mining" name = "scikit-learn" +version = "0.23.2" +description = "A set of python modules for machine learning and data mining" +category = "main" optional = false python-versions = ">=3.6" -version = "0.23.2" [package.dependencies] joblib = ">=0.11" @@ -837,23 +825,23 @@ threadpoolctl = ">=2.0.0" alldeps = ["numpy (>=1.13.3)", "scipy (>=0.19.1)"] [[package]] -category = "main" -description = "SciPy: Scientific Library for Python" name = "scipy" +version = "1.5.2" +description = "SciPy: Scientific Library for Python" +category = "main" optional = false python-versions = ">=3.6" -version = "1.5.2" [package.dependencies] numpy = ">=1.14.5" [[package]] -category = "main" -description = "seaborn: statistical data visualization" name = "seaborn" +version = "0.10.1" +description = "seaborn: statistical data visualization" +category = "main" optional = false python-versions = ">=3.6" -version = "0.10.1" [package.dependencies] matplotlib = ">=2.1.2" @@ -862,31 +850,44 @@ pandas = ">=0.22.0" scipy = ">=1.0.1" [[package]] +name = "setuptools" +version = "65.6.3" +description = "Easily download, build, install, upgrade, and uninstall Python packages" category = "main" -description = "Python 2 and 3 compatibility utilities" +optional = false +python-versions = ">=3.7" + +[package.extras] +docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "pygments-github-lexers (==0.0.5)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-favicon", "sphinx-hoverxref (<2)", "sphinx-inline-tabs", "sphinx-notfound-page (==0.8.3)", "sphinx-reredirects", "sphinxcontrib-towncrier"] +testing = ["build[virtualenv]", "filelock (>=3.4.0)", "flake8 (<5)", "flake8-2020", "ini2toml[lite] (>=0.9)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "pip (>=19.1)", "pip-run (>=8.8)", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)", "pytest-perf", "pytest-timeout", "pytest-xdist", "tomli-w (>=1.0.0)", "virtualenv (>=13.0.0)", "wheel"] +testing-integration = ["build[virtualenv]", "filelock (>=3.4.0)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "pytest", "pytest-enabler", "pytest-xdist", "tomli", "virtualenv (>=13.0.0)", "wheel"] + +[[package]] name = "six" +version = "1.15.0" +description = "Python 2 and 3 compatibility utilities" +category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*" -version = "1.15.0" [[package]] -category = "main" -description = "A set of python modules for machine learning and data mining" name = "sklearn" +version = "0.0" +description = "A set of python modules for machine learning and data mining" +category = "main" optional = false python-versions = "*" -version = "0.0" [package.dependencies] scikit-learn = "*" [[package]] -category = "main" -description = "SMAC3, a Python implementation of 'Sequential Model-based Algorithm Configuration'." name = "smac" +version = "0.12.3" +description = "SMAC3, a Python implementation of 'Sequential Model-based Algorithm Configuration'." +category = "main" optional = true python-versions = ">=3.5.2" -version = "0.12.3" [package.dependencies] ConfigSpace = ">=0.4.9,<0.5" @@ -900,29 +901,29 @@ scikit-learn = ">=0.22.0" scipy = ">=0.18.1" [package.extras] -all = ["sphinx-gallery (0.5.0)", 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"*" -version = "1.0.5" [package.dependencies] numpy = ">=1.9.1" @@ -931,42 +932,42 @@ six = ">=1.9.0" [package.extras] doc = ["Sphinx (>=0.5.1)", "pygments"] -test = ["nose (>=1.3.0)", "parameterized", "flake8"] +test = ["flake8", "nose (>=1.3.0)", "parameterized"] [[package]] -category = "main" -description = "threadpoolctl" name = "threadpoolctl" +version = "2.1.0" +description = "threadpoolctl" +category = "main" optional = false python-versions = ">=3.5" -version = "2.1.0" [[package]] -category = "main" -description = "Python Library for Tom's Obvious, Minimal Language" name = "toml" +version = "0.10.1" +description = "Python Library for Tom's Obvious, Minimal Language" +category = "main" optional = false python-versions = "*" -version = "0.10.1" [[package]] -category = "main" -description = "Fast, Extensible Progress Meter" name = "tqdm" +version = "4.48.2" +description = "Fast, Extensible Progress Meter" +category = "main" optional = false python-versions = ">=2.6, !=3.0.*, !=3.1.*" -version = "4.48.2" [package.extras] -dev = ["py-make (>=0.1.0)", "twine", "argopt", "pydoc-markdown"] +dev = ["argopt", "py-make (>=0.1.0)", "pydoc-markdown", "twine"] [[package]] -category = "dev" -description = "Traitlets Python configuration system" name = "traitlets" +version = "5.0.2" +description = "Traitlets Python configuration system" +category = "dev" optional = false python-versions = ">=3.7" -version = "5.0.2" [package.dependencies] ipython-genutils = "*" @@ -975,12 +976,12 @@ ipython-genutils = "*" test = ["pytest"] [[package]] -category = "main" -description = "TSPLIB95 works with TSPLIB95 files." name = "tsplib95" +version = "0.7.1" +description = "TSPLIB95 works with TSPLIB95 files." +category = "main" optional = false python-versions = "*" -version = "0.7.1" [package.dependencies] Click = ">=6.0" @@ -989,47 +990,47 @@ networkx = ">=2.1,<3.0" tabulate = ">=0.8.7,<0.9.0" [[package]] -category = "main" -description = "Backported and Experimental Type Hints for Python 3.5+" name = "typing-extensions" +version = "3.7.4.3" +description = "Backported and Experimental Type Hints for Python 3.5+" +category = "main" optional = false python-versions = "*" -version = "3.7.4.3" [[package]] -category = "dev" -description = "Measures the displayed width of unicode strings in a terminal" name = "wcwidth" +version = "0.2.5" +description = "Measures the displayed width of unicode strings in a terminal" +category = "dev" optional = false python-versions = "*" -version = "0.2.5" [[package]] -category = "main" -description = "A built-package format for Python" name = "wheel" +version = "0.38.1" +description = "A built-package format for Python" +category = "main" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "0.34.2" +python-versions = ">=3.7" [package.extras] -test = ["pytest (>=3.0.0)", "pytest-cov"] +test = ["pytest (>=3.0.0)"] [[package]] -category = "main" -description = "Module for decorators, wrappers and monkey patching." name = "wrapt" +version = "1.12.1" +description = "Module for decorators, wrappers and monkey patching." +category = "main" optional = false python-versions = "*" -version = "1.12.1" [[package]] -category = "main" -description = "N-D labeled arrays and datasets in Python" name = "xarray" +version = "0.16.0" +description = "N-D labeled arrays and datasets in Python" +category = "main" optional = false python-versions = ">=3.6" -version = "0.16.0" [package.dependencies] numpy = ">=1.15" @@ -1037,44 +1038,44 @@ pandas = ">=0.25" setuptools = ">=41.2" [[package]] -category = "main" -description = "XGBoost Python Package" name = "xgboost" +version = "1.2.0" +description = "XGBoost Python Package" +category = "main" optional = false python-versions = ">=3.6" -version = "1.2.0" [package.dependencies] numpy = "*" scipy = "*" [package.extras] -dask = ["dask", "pandas", "distributed"] +dask = ["dask", "distributed", "pandas"] datatable = ["datatable"] pandas = 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