Try import and use zarr v3 OR zarr v2#24
Draft
will-moore wants to merge 1 commit intoBioNGFF:mainfrom
Draft
Conversation
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
1 participant
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Adding support for using zarr-python v2.x means that we can use this in environments with packages that still use zarr v2 (e.g. omero-cli-zarr or ome-zarr-py)
We may not need to merge this - better to focus on updating those packages.
Tested using zarr
v2.18.11with various images from #13Worked with all except
python register.py --target 21520 s3://gs-public-zarr-archive/CMU-1.ome.zarr/0 --nosignrequest