changes in response to PR comments

Author: mjschmidt271

components/eamxx/docs/developer/dev_testing/test_all_eamxx.md

@@ -203,9 +203,9 @@ cd ${e3sm_root}/components/eamxx
     ```
 <!-- markdownlint-enable MD013 -->
 
-If you are unsure of the cmake configuration for you development cycle, one
-trick you can use is to run `test-all-eamxx` for the `dbg` test and just
-copy the cmake command it prints (then ctrl-C the process).
+If you are unsure of the CMake configuration for you development cycle, one
+trick you can use is to run `test-all-eamxx --config-only`
+for the `dbg` test and then copy the `cmake` commands from the resulting output.
 
 ```shell
 cd $eamxx_repo/components/eamxx
@@ -220,7 +220,7 @@ Considerations for using `test-all-eamxx`:
 
 - Your machine must be known to our scripts, see above.
 - If you try to run commands by-hand (i.e., outside of `test-all-eamxx`,
-`cmake`, `make`, `ctest`, etc), you'll need to
+`cmake`, `make`, `ctest`, etc.), you'll need to
 load the eamxx-env into your shell, which can be achieved by running
 `cd eamxx/scripts; eval $(./eamxx-env-cmd $machine)`
 - `test-all-eamxx` expects to be run from a compute node if you

components/eamxx/docs/developer/dev_testing/testing_for_development.md

@@ -27,7 +27,7 @@ be the `eamxx_inject_ash_process_interface.<x>pp` files, located at
 
     #include "share/atm_process/atmosphere_process.hpp"
 
-    namespace eamxx {
+    namespace scream {
     class MAMInjectAsh : public AtmosphereProcess {
     public:
       MAMInjectAsh(const ekat::Comm &comm, const ekat::ParameterList &params);
@@ -47,7 +47,7 @@ be the `eamxx_inject_ash_process_interface.<x>pp` files, located at
       Field lat;
       Field lon;
     }
-    } // namespace eamxx
+    } // namespace scream
 
     #endif // EAMXX_MAM_INJECT_ASH_HPP
     ```
@@ -56,7 +56,7 @@ be the `eamxx_inject_ash_process_interface.<x>pp` files, located at
     #include "ash_source_calculation.hpp"
     #include "eamxx_inject_ash_process_interface.hpp"
 
-    namespace eamxx {
+    namespace scream {
 
     MAMInjectAsh::MAMInjectAsh(const ekat::Comm &comm,
                                const ekat::ParameterList &params)
@@ -83,7 +83,7 @@ be the `eamxx_inject_ash_process_interface.<x>pp` files, located at
       ash.update(source_mask, rate * dt,
                  decay); // ash = decay*ash + rate*dt*source_mask
     }
-    } // namespace eamxx
+    } // namespace scream
     ```
 
 ### Add the New Process to CMake Build
@@ -270,7 +270,7 @@ though [NetCDF](https://www.unidata.ucar.edu/software/netcdf/) can also be used.
     #include "ash_source_calculation.hpp"
 
     namespace {
-    using namespace eamxx;
+    using namespace scream;
     TEST_CASE("verify compute_ash_injection_rate", "mam")
     {
       // initialize the data and test variables

components/eamxx/docs/developer/io.md

@@ -1,5 +1,5 @@
 # Input-Output
 
 In EAMxx, I/O is handled through the SCORPIO library, currently a submodule of
-E3SM. The `eamxx_io` library within eamxx allows to interface the EAMxx
+E3SM. The `scream_io` library within eamxx allows to interface the EAMxx
 infrastructure classes with the SCORPIO library.

components/eamxx/docs/user/index.md

@@ -13,21 +13,3 @@ In the meantime, in case you do not find the information you need,
 we suggest visiting our public
 [EAMxx user guide](https://acme-climate.atlassian.net/wiki/spaces/DOC/pages/3858890786/EAMxx+User+s+Guide)
 on Confluence.
-
-<!-- ## [EAMxx Case Basics](eamxx_cases.md)
-
-## [Testing](user_testing.md)
-
-## [Model Configuration](model_input.md)
-
-## [Nudging](nudging.md)
-
-## [Extra Radiation Calls](clean_clear_sky.md)
-
-## [COSP](cosp.md)
-
-## [Regionally Refined EAMxx](rrm_eamxx.md)
-
-## [Doubly Periodic EAMxx](dp_eamxx.md)
-
-## [PyEAMxx](pyeamxx.md) -->