build issue for homme standalone on Perlmutter / NERSC #586
Description
When trying to build homme_tool on Perlmutter I hit hundreds of lines of linker errors. After some trial and error I confirmed that adding -lstdc++ to the linker line fixed the problem.
Commands I used to clone master and reproduce the linker error:
e3sm_root=${SCRATCH}/e3sm_scratch/tmp_clone
mkdir -p ${e3sm_root}
cd ${e3sm_root}
git clone -b jayeshkrishna/homme/port_to_scorpio_1.6.2 git@github.com:E3SM-Project/E3SM.git ./
git submodule sync ; git submodule update --init --recursive
cd ${e3sm_root}/components/homme
eval $(${e3sm_root}/cime/CIME/Tools/get_case_env)
mach_file=${e3sm_root}/components/homme/cmake/machineFiles/perlmutter-gnu.cmake
cmake -C ${mach_file} \
-DBUILD_HOMME_WITHOUT_PIOLIBRARY=FALSE \
-DHOMME_ENABLE_COMPOSE=FALSE \
-DBUILD_HOMME_THETA_KOKKOS=FALSE \
-DBUILD_HOMME_PREQX_KOKKOS=FALSE \
-DHOMME_BUILD_EXECS=FALSE \
-DBUILD_HOMME_TOOL=TRUE \
${e3sm_root}/components/homme
make -j4 homme_tool