chromVAR/NEWS at master · GreenleafLab/chromVAR · GitHub

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# chromVAR 0.99.1

Updates to vignettes.

# chromVAR 0.99.1

Changes in reponse to Bioconductor review:

* Removed deprecated snake_case functions
* Internal changes to make code neater, less prone to problems

# chromVAR 0.99.0

First version submitted to Bioconductor

# chromVAR 0.4.7

Made it mandatory to provide genome for some functions, rather than defaulting
to hg19.  Allow usage of FaFile or DNAStringSet instead of BSgenome for genome
input.

# chromVAR 0.4.2

ChromVAR is a package for determining variation in chromatin accessibility
across sets of peaks sharing a common genomic annotations. Designed primarily
for single-cell or sparse chromatin accessibility data, e.g. from scATAC-seq or
sparse bulk ATAC or DNAse-seq experiments.