Merge pull request #220 from IndicoDataSolutions/mawelborn/fix-rowspan-colspan

mawelborn · web-flow · commit 1dbad06ed321 · 2025-09-10T09:05:14.000-10:00
Account for Row and Column Spans in ETL Output Tables
diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -6,6 +6,16 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.1.0/),
 and versions match the minimum IPA version required to use functionality.
 
 
+## [v7.2.1] - 2025-09-09
+
+### Fixed
+
+- Account for row spans and column spans in ETL output tables.
+  Affects `Table.from_dict()`, `Range.from_dict()`, and `EtlOutput.table_cell_for()`.
+- Narrow `AutoReviewed.changes` type to v3 result file changes,
+  as that's the only version supported by `results` and `polling` modules.
+
+
 ## [v7.2.0] - 2025-06-17
 
 ### Added
@@ -255,6 +265,7 @@ This is the first major version release tested to work on Indico 6.X.
 - Row Association now also sorting on 'bbtop'.
 
 
+[v7.2.1]: https://github.com/IndicoDataSolutions/indico-toolkit-python/compare/v7.2.0...v7.2.1
 [v7.2.0]: https://github.com/IndicoDataSolutions/indico-toolkit-python/compare/v6.14.2...v7.2.0
 [v6.14.2]: https://github.com/IndicoDataSolutions/indico-toolkit-python/compare/v6.14.1...v6.14.2
 [v6.14.1]: https://github.com/IndicoDataSolutions/indico-toolkit-python/compare/v6.14.0...v6.14.1
diff --git a/indico_toolkit/__init__.py b/indico_toolkit/__init__.py
@@ -21,4 +21,4 @@
     "ToolkitStaggeredLoopError",
     "ToolkitStatusError",
 )
-__version__ = "7.2.0"
+__version__ = "7.2.1"
diff --git a/indico_toolkit/etloutput/etloutput.py b/indico_toolkit/etloutput/etloutput.py
@@ -96,15 +96,11 @@ def table_cell_for(self, token: Token) -> "tuple[Table, Cell]":
         else:
             raise TableCellNotFoundError(f"no table contains {token!r}")
 
-        try:
-            row_index = bisect_left(
-                table.rows, token_vmid, key=lambda row: row[0].box.bottom
-            )
-            row = table.rows[row_index]
-
-            cell_index = bisect_left(row, token_hmid, key=attrgetter("box.right"))
-            cell = row[cell_index]
-        except (IndexError, ValueError) as error:
-            raise TableCellNotFoundError(f"no cell contains {token!r}") from error
-
-        return table, cell
+        for cell in table.cells:
+            if (
+                (cell.box.top  <= token_vmid <= cell.box.bottom) and
+                (cell.box.left <= token_hmid <= cell.box.right)
+            ):  # fmt: skip
+                return table, cell
+        else:
+            raise TableCellNotFoundError(f"no cell contains {token!r}")
diff --git a/indico_toolkit/etloutput/range.py b/indico_toolkit/etloutput/range.py
@@ -21,8 +21,8 @@ def from_dict(cell: object) -> "Range":
         columns = get(cell, list, "columns")
 
         return Range(
-            row=rows[0],
-            column=columns[0],
+            row=min(rows),
+            column=min(columns),
             rowspan=len(rows),
             columnspan=len(columns),
             rows=tuple(rows),
diff --git a/indico_toolkit/etloutput/table.py b/indico_toolkit/etloutput/table.py
@@ -20,21 +20,35 @@ def from_dict(table: object) -> "Table":
         """
         page = get(table, int, "page_num")
         get(table, dict, "position")["page_num"] = page
+        row_count = get(table, int, "num_rows")
+        column_count = get(table, int, "num_columns")
 
         cells = tuple(
             sorted(
                 (Cell.from_dict(cell, page) for cell in get(table, list, "cells")),
                 key=attrgetter("range"),
             )
         )
+        cells_by_row_col = {
+            (row, column): cell
+            for cell in cells
+            for row in cell.range.rows
+            for column in cell.range.columns
+        }
         rows = tuple(
-            tuple(cell for cell in cells if row in cell.range.rows)
-            for row in range(get(table, int, "num_rows"))
-        )
+            tuple(
+                cells_by_row_col[row, column]
+                for column in range(column_count)
+            )
+            for row in range(row_count)
+        )  # fmt: skip
         columns = tuple(
-            tuple(cell for cell in cells if column in cell.range.columns)
-            for column in range(get(table, int, "num_columns"))
-        )
+            tuple(
+                cells_by_row_col[row, column]
+                for row in range(row_count)
+            )
+            for column in range(column_count)
+        )  # fmt: skip
 
         return Table(
             box=Box.from_dict(get(table, dict, "position")),
diff --git a/indico_toolkit/polling/autoreview.py b/indico_toolkit/polling/autoreview.py
@@ -30,7 +30,7 @@
 
 @dataclass
 class AutoReviewed:
-    changes: "dict[str, Any] | list[dict[str, Any]]"
+    changes: "list[dict[str, Any]]"
     reject: bool = False
     stp: bool = False
 
diff --git a/pyproject.toml b/pyproject.toml
@@ -12,7 +12,7 @@ authors = [
 readme = "README.md"
 urls = { source = "https://github.com/IndicoDataSolutions/Indico-Solutions-Toolkit" }
 requires-python = ">=3.10"
-version = "7.2.0"
+version = "7.2.1"
 dependencies = ["indico-client (>=6.14.0,<7.0.0)"]
 
 [project.optional-dependencies]
diff --git a/tests/data/etloutput/4725/112731/112257/etl_output_rs_cs.json b/tests/data/etloutput/4725/112731/112257/etl_output_rs_cs.json
@@ -0,0 +1 @@
+{"email_metadata":{},"full_text":"indico-file:///storage/submission/4725/112731/112257/full_text.txt","num_pages":1,"pages":[{"blocks":"indico-file:///storage/submission/4725/112731/112257/page_0_blocks.json","characters":"indico-file:///storage/submission/4725/112731/112257/page_0_chars.json","doc_offset":{"end":151,"start":0},"dpi":{"dpix":300,"dpiy":300},"filename":"Rowspan Colspan Sample.png","image":"indico-file:///storage/submission/4725/112731/112257/original_page_0.png","page_info":"indico-file:///storage/submission/4725/112731/112257/page_info_0.json","page_num":0,"size":{"height":3883,"width":2556},"tables":"indico-file:///storage/submission/4725/112731/112257/tables_0.json","text":"indico-file:///storage/submission/4725/112731/112257/page_0_text.txt","thumbnail":"indico-file:///storage/submission/4725/112731/112257/original_thumbnail_0.png","tokens":"indico-file:///storage/submission/4725/112731/112257/page_0_tokens.json"}]}
diff --git a/tests/data/etloutput/4725/112731/112257/page_0_text.txt b/tests/data/etloutput/4725/112731/112257/page_0_text.txt
@@ -0,0 +1,7 @@
+Rowspan / Colspan Sample
+Alfa	Bravo	Charlie	Delta
+Echo	Foxtrot		Golf
+	Hotel	India	Juliett
+Kilo			Mike
+November	Lima		Oscar
+formatted by Markdeep 1.18_d
diff --git a/tests/data/etloutput/4725/112731/112257/page_0_tokens.json b/tests/data/etloutput/4725/112731/112257/page_0_tokens.json
@@ -0,0 +1 @@
+[{"block_offset":{"end":7,"start":0},"doc_offset":{"end":7,"start":0},"page_num":0,"page_offset":{"end":7,"start":0},"position":{"bbBot":287,"bbLeft":561,"bbRight":1015,"bbTop":192,"bottom":287,"left":561,"right":1015,"top":192},"style":{"background_color":null,"bold":null,"font_face":null,"font_size":null,"handwriting":false,"italic":null,"text_color":null,"underlined":null},"text":"Rowspan"},{"block_offset":{"end":9,"start":8},"doc_offset":{"end":9,"start":8},"page_num":0,"page_offset":{"end":9,"start":8},"position":{"bbBot":290,"bbLeft":1070,"bbRight":1123,"bbTop":187,"bottom":290,"left":1070,"right":1123,"top":187},"style":{"background_color":null,"bold":null,"font_face":null,"font_size":null,"handwriting":false,"italic":null,"text_color":null,"underlined":null},"text":"/"},{"block_offset":{"end":17,"start":10},"doc_offset":{"end":17,"start":10},"page_num":0,"page_offset":{"end":17,"start":10},"position":{"bbBot":291,"bbLeft":1158,"bbRight":1547,"bbTop":185,"bottom":291,"left":1158,"right":1547,"top":185},"style":{"background_color":null,"bold":null,"font_face":null,"font_size":null,"handwriting":false,"italic":null,"text_color":null,"underlined":null},"text":"Colspan"},{"block_offset":{"end":24,"start":18},"doc_offset":{"end":24,"start":18},"page_num":0,"page_offset":{"end":24,"start":18},"position":{"bbBot":288,"bbLeft":1601,"bbRight":1978,"bbTop":184,"bottom":288,"left":1601,"right":1978,"top":184},"style":{"background_color":null,"bold":null,"font_face":null,"font_size":null,"handwriting":false,"italic":null,"text_color":null,"underlined":null},"text":"Sample"},{"block_offset":{"end":4,"start":0},"doc_offset":{"end":29,"start":25},"page_num":0,"page_offset":{"end":29,"start":25},"position":{"bbBot":520,"bbLeft":772,"bbRight":858,"bbTop":477,"bottom":520,"left":772,"right":858,"top":477},"style":{"background_color":null,"bold":null,"font_face":null,"font_size":null,"handwriting":false,"italic":null,"text_color":null,"underlined":null},"text":"Alfa"},{"block_offset":{"end":10,"start":5},"doc_offset":{"end":35,"start":30},"page_num":0,"page_offset":{"end":35,"start":30},"position":{"bbBot":520,"bbLeft":1109,"bbRight":1242,"bbTop":476,"bottom":520,"left":1109,"right":1242,"top":476},"style":{"background_color":null,"bold":null,"font_face":null,"font_size":null,"handwriting":false,"italic":null,"text_color":null,"underlined":null},"text":"Bravo"},{"block_offset":{"end":18,"start":11},"doc_offset":{"end":43,"start":36},"page_num":0,"page_offset":{"end":43,"start":36},"position":{"bbBot":521,"bbLeft":1358,"bbRight":1523,"bbTop":475,"bottom":521,"left":1358,"right":1523,"top":475},"style":{"background_color":null,"bold":null,"font_face":null,"font_size":null,"handwriting":false,"italic":null,"text_color":null,"underlined":null},"text":"Charlie"},{"block_offset":{"end":24,"start":19},"doc_offset":{"end":49,"start":44},"page_num":0,"page_offset":{"end":49,"start":44},"position":{"bbBot":518,"bbLeft":1635,"bbRight":1757,"bbTop":473,"bottom":518,"left":1635,"right":1757,"top":473},"style":{"background_color":null,"bold":null,"font_face":null,"font_size":null,"handwriting":false,"italic":null,"text_color":null,"underlined":null},"text":"Delta"},{"block_offset":{"end":29,"start":25},"doc_offset":{"end":54,"start":50},"page_num":0,"page_offset":{"end":54,"start":50},"position":{"bbBot":697,"bbLeft":767,"bbRight":875,"bbTop":652,"bottom":697,"left":767,"right":875,"top":652},"style":{"background_color":null,"bold":null,"font_face":null,"font_size":null,"handwriting":false,"italic":null,"text_color":null,"underlined":null},"text":"Echo"},{"block_offset":{"end":37,"start":30},"doc_offset":{"end":62,"start":55},"page_num":0,"page_offset":{"end":62,"start":55},"position":{"bbBot":648,"bbLeft":1106,"bbRight":1269,"bbTop":592,"bottom":648,"left":1106,"right":1269,"top":592},"style":{"background_color":null,"bold":null,"font_face":null,"font_size":null,"handwriting":false,"italic":null,"text_color":null,"underlined":null},"text":"Foxtrot"},{"block_offset":{"end":43,"start":39},"doc_offset":{"end":68,"start":64},"page_num":0,"page_offset":{"end":68,"start":64},"position":{"bbBot":640,"bbLeft":1636,"bbRight":1727,"bbTop":597,"bottom":640,"left":1636,"right":1727,"top":597},"style":{"background_color":null,"bold":null,"font_face":null,"font_size":null,"handwriting":false,"italic":null,"text_color":null,"underlined":null},"text":"Golf"},{"block_offset":{"end":50,"start":45},"doc_offset":{"end":75,"start":70},"page_num":0,"page_offset":{"end":75,"start":70},"position":{"bbBot":754,"bbLeft":1106,"bbRight":1231,"bbTop":698,"bottom":754,"left":1106,"right":1231,"top":698},"style":{"background_color":null,"bold":null,"font_face":null,"font_size":null,"handwriting":false,"italic":null,"text_color":null,"underlined":null},"text":"Hotel"},{"block_offset":{"end":56,"start":51},"doc_offset":{"end":81,"start":76},"page_num":0,"page_offset":{"end":81,"start":76},"position":{"bbBot":748,"bbLeft":1355,"bbRight":1465,"bbTop":706,"bottom":7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diff --git a/tests/data/etloutput/4725/112731/112257/tables_0.json b/tests/data/etloutput/4725/112731/112257/tables_0.json
@@ -0,0 +1 @@
+[{"cells":[{"cell_type":"header","columns":[0],"doc_offsets":[{"end":29,"start":25}],"page_offsets":[{"end":29,"start":25}],"position":{"bottom":562,"left":713,"right":1052,"top":435},"rows":[0],"text":"Alfa"},{"cell_type":"header","columns":[1],"doc_offsets":[{"end":35,"start":30}],"page_offsets":[{"end":35,"start":30}],"position":{"bottom":561,"left":1051,"right":1301,"top":434},"rows":[0],"text":"Bravo"},{"cell_type":"header","columns":[2],"doc_offsets":[{"end":43,"start":36}],"page_offsets":[{"end":43,"start":36}],"position":{"bottom":560,"left":1300,"right":1578,"top":433},"rows":[0],"text":"Charlie"},{"cell_type":"header","columns":[3],"doc_offsets":[{"end":49,"start":44}],"page_offsets":[{"end":49,"start":44}],"position":{"bottom":561,"left":1580,"right":1821,"top":430},"rows":[0],"text":"Delta"},{"cell_type":"content","columns":[0],"doc_offsets":[{"end":54,"start":50}],"page_offsets":[{"end":54,"start":50}],"position":{"bottom":778,"left":712,"right":1052,"top":561},"rows":[1,2],"text":"Echo"},{"cell_type":"content","columns":[1,2],"doc_offsets":[{"end":62,"start":55}],"page_offsets":[{"end":62,"start":55}],"position":{"bottom":670,"left":1052,"right":1580,"top":561},"rows":[1],"text":"Foxtrot"},{"cell_type":"content","columns":[3],"doc_offsets":[{"end":68,"start":64}],"page_offsets":[{"end":68,"start":64}],"position":{"bottom":669,"left":1580,"right":1821,"top":560},"rows":[1],"text":"Golf"},{"cell_type":"content","columns":[1],"doc_offsets":[{"end":75,"start":70}],"page_offsets":[{"end":75,"start":70}],"position":{"bottom":778,"left":1052,"right":1301,"top":670},"rows":[2],"text":"Hotel"},{"cell_type":"content","columns":[2],"doc_offsets":[{"end":81,"start":76}],"page_offsets":[{"end":81,"start":76}],"position":{"bottom":777,"left":1301,"right":1581,"top":669},"rows":[2],"text":"India"},{"cell_type":"content","columns":[3],"doc_offsets":[{"end":89,"start":82}],"page_offsets":[{"end":89,"start":82}],"position":{"bottom":776,"left":1580,"right":1822,"top":668},"rows":[2],"text":"Juliett"},{"cell_type":"content","columns":[0],"doc_offsets":[{"end":94,"start":90}],"page_offsets":[{"end":94,"start":90}],"position":{"bottom":891,"left":712,"right":1053,"top":778},"rows":[3],"text":"Kilo"},{"cell_type":"content","columns":[1,2],"doc_offsets":[],"page_offsets":[],"position":{"bottom":997,"left":1052,"right":1582,"top":776},"rows":[3,4],"text":"Lima"},{"cell_type":"content","columns":[3],"doc_offsets":[{"end":101,"start":97}],"page_offsets":[{"end":101,"start":97}],"position":{"bottom":889,"left":1581,"right":1822,"top":775},"rows":[3],"text":"Mike"},{"cell_type":"content","columns":[0],"doc_offsets":[{"end":110,"start":102}],"page_offsets":[{"end":110,"start":102}],"position":{"bottom":998,"left":713,"right":1053,"top":889},"rows":[4],"text":"November"},{"cell_type":"content","columns":[3],"doc_offsets":[{"end":122,"start":117}],"page_offsets":[{"end":122,"start":117}],"position":{"bottom":995,"left":1581,"right":1824,"top":888},"rows":[4],"text":"Oscar"}],"doc_offsets":[{"end":94,"start":25},{"end":122,"start":97}],"num_columns":4,"num_rows":5,"page_num":0,"page_offsets":[{"end":94,"start":25},{"end":122,"start":97}],"position":{"bottom":998,"left":711,"right":1824,"top":430},"table_id":0,"table_offset":{"column":0,"row":0}}]
diff --git a/tests/etloutput/test_rowspan_colspan.py b/tests/etloutput/test_rowspan_colspan.py

Original file line number	Diff line number	Diff line change
`@@ -21,4 +21,4 @@`
`21`	`21`	`"ToolkitStaggeredLoopError",`
`22`	`22`	`"ToolkitStatusError",`
`23`	`23`	`)`
`24`		`-__version__ = "7.2.0"`
	`24`	`+__version__ = "7.2.1"`
Original file line number	Diff line number	Diff line change
`@@ -0,0 +1 @@`
	`1`	+{"email_metadata":{},"full_text":"indico-file:///storage/submission/4725/112731/112257/full_text.txt","num_pages":1,"pages":[{"blocks":"indico-file:///storage/submission/4725/112731/112257/page_0_blocks.json","characters":"indico-file:///storage/submission/4725/112731/112257/page_0_chars.json","doc_offset":{"end":151,"start":0},"dpi":{"dpix":300,"dpiy":300},"filename":"Rowspan Colspan Sample.png","image":"indico-file:///storage/submission/4725/112731/112257/original_page_0.png","page_info":"indico-file:///storage/submission/4725/112731/112257/page_info_0.json","page_num":0,"size":{"height":3883,"width":2556},"tables":"indico-file:///storage/submission/4725/112731/112257/tables_0.json","text":"indico-file:///storage/submission/4725/112731/112257/page_0_text.txt","thumbnail":"indico-file:///storage/submission/4725/112731/112257/original_thumbnail_0.png","tokens":"indico-file:///storage/submission/4725/112731/112257/page_0_tokens.json"}]}
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