Fix many build warnings #6
Workflow file for this run
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| --- | |
| name: UKMO Integration Test | |
| on: | |
| pull_request: | |
| branches: [develop] | |
| concurrency: | |
| group: ${{ github.ref }} | |
| cancel-in-progress: ${{ github.ref != 'refs/heads/develop' }} | |
| env: | |
| REPO: ${{ github.event.repository.name }} | |
| PR: pr-${{ github.event.number }} | |
| jobs: | |
| build-and-test: | |
| if: | | |
| ( github.repository_owner == 'JCSDA-internal' && github.event.pull_request.draft == false ) | |
| name: gnu-openmpi | |
| runs-on: jedi-self-hosted-ext | |
| steps: | |
| - name: Pre-submit cleanup | |
| run: | | |
| rm -fr ./${{ env.PR }} || true | |
| ls -lgo ./ | |
| - name: Checkout ${{ env.REPO }} | |
| uses: actions/checkout@v4 | |
| with: | |
| path: ./${{ env.PR }}/${{ env.REPO }} | |
| - name: Initiate bundle | |
| working-directory: ${{ env.PR }} | |
| run: ln -sf ./${{ env.REPO }}/CI/meto/* . | |
| - name: Checkout jedicmake | |
| uses: actions/checkout@v4 | |
| with: | |
| path: ./${{ env.PR }}/jedicmake | |
| repository: JCSDA-internal/jedi-cmake | |
| submodules: recursive | |
| token: ${{ secrets.GH_PAT }} | |
| - name: Checkout ioda | |
| uses: actions/checkout@v4 | |
| with: | |
| path: ./${{ env.PR }}/ioda | |
| repository: JCSDA-internal/ioda | |
| token: ${{ secrets.GH_PAT }} | |
| - name: Check build-group for ioda | |
| if: github.event_name == 'pull_request' | |
| run: ./${{ env.PR }}/check-build-group.sh ./${{ env.PR }}/ioda | |
| - name: Checkout ufo | |
| uses: actions/checkout@v4 | |
| with: | |
| path: ./${{ env.PR }}/ufo | |
| repository: JCSDA-internal/ufo | |
| token: ${{ secrets.GH_PAT }} | |
| - name: Check build-group for ufo | |
| if: github.event_name == 'pull_request' | |
| run: ./${{ env.PR }}/check-build-group.sh ./${{ env.PR }}/ufo | |
| - name: Checkout saber | |
| uses: actions/checkout@v4 | |
| with: | |
| path: ./${{ env.PR }}/saber | |
| repository: JCSDA-internal/saber | |
| token: ${{ secrets.GH_PAT }} | |
| - name: Check build-group for saber | |
| if: github.event_name == 'pull_request' | |
| run: ./${{ env.PR }}/check-build-group.sh ./${{ env.PR }}/saber | |
| - name: Checkout vader | |
| uses: actions/checkout@v4 | |
| with: | |
| path: ./${{ env.PR }}/vader | |
| repository: JCSDA-internal/vader | |
| token: ${{ secrets.GH_PAT }} | |
| - name: Check build-group for vader | |
| if: github.event_name == 'pull_request' | |
| run: ./${{ env.PR }}/check-build-group.sh ./${{ env.PR }}/vader | |
| - name: Checkout monio | |
| uses: actions/checkout@v4 | |
| with: | |
| path: ./${{ env.PR }}/monio | |
| repository: MetOffice/monio | |
| token: ${{ secrets.GH_PAT }} | |
| - name: Check build-group for monio | |
| if: github.event_name == 'pull_request' | |
| run: ./${{ env.PR }}/check-build-group.sh ./${{ env.PR }}/monio | |
| - name: Checkout opsinputs | |
| uses: actions/checkout@v4 | |
| with: | |
| path: ./${{ env.PR }}/opsinputs | |
| repository: MetOffice/opsinputs | |
| token: ${{ secrets.GH_PAT }} | |
| - name: Check build-group for opsinputs | |
| if: github.event_name == 'pull_request' | |
| run: ./${{ env.PR }}/check-build-group.sh ./${{ env.PR }}/opsinputs | |
| - name: Checkout nemo-feedback | |
| uses: actions/checkout@v4 | |
| with: | |
| path: ./${{ env.PR }}/nemo-feedback | |
| repository: MetOffice/nemo-feedback | |
| token: ${{ secrets.GH_PAT }} | |
| - name: Check build-group for nemo-feedback | |
| if: github.event_name == 'pull_request' | |
| run: ./${{ env.PR }}/check-build-group.sh ./${{ env.PR }}/nemo-feedback | |
| - name: Checkout orca-jedi | |
| uses: actions/checkout@v4 | |
| with: | |
| path: ./${{ env.PR }}/orca-jedi | |
| repository: MetOffice/orca-jedi | |
| token: ${{ secrets.GH_PAT }} | |
| lfs: true | |
| - name: Check build-group for orca-jedi | |
| if: github.event_name == 'pull_request' | |
| run: ./${{ env.PR }}/check-build-group.sh ./${{ env.PR }}/orca-jedi | |
| - name: Checkout jjtests | |
| uses: actions/checkout@v4 | |
| with: | |
| path: ./${{ env.PR }}/jjtests | |
| repository: MetOffice/jjtests | |
| token: ${{ secrets.GH_PAT }} | |
| - name: Check build-group for jjtests | |
| if: github.event_name == 'pull_request' | |
| run: ./${{ env.PR }}/check-build-group.sh ./${{ env.PR }}/jjtests | |
| - name: Checkout ops-um-jedi | |
| uses: actions/checkout@v4 | |
| with: | |
| path: ./${{ env.PR }}/ops-um-jedi | |
| repository: JCSDA-internal/ops-um-jedi | |
| token: ${{ secrets.GH_PAT }} | |
| - name: Check build-group for ops-um-jedi | |
| if: github.event_name == 'pull_request' | |
| run: ./${{ env.PR }}/check-build-group.sh ./${{ env.PR }}/ops-um-jedi | |
| - name: Checkout lfric-jedi | |
| uses: actions/checkout@v4 | |
| with: | |
| path: ./${{ env.PR }}/lfric-jedi | |
| repository: JCSDA-internal/lfric-jedi | |
| token: ${{ secrets.GH_PAT }} | |
| - name: Check build-group for lfric-jedi | |
| if: github.event_name == 'pull_request' | |
| run: ./${{ env.PR }}/check-build-group.sh ./${{ env.PR }}/lfric-jedi | |
| - name: Build and Test | |
| env: | |
| # Container environment | |
| WORKDIR: /var/tmp/${{ env.REPO }}/${{ env.PR }} | |
| MOBB_DATA: /var/tmp/mobb-data | |
| shell: bash | |
| run: | | |
| az acr login --name ngmssboxjediacr | |
| ln -sf /testdata/mobb-data -t ${{ github.workspace }} | |
| docker run --rm \ | |
| --name ${REPO}_${PR}_${GITHUB_SHA::7} \ | |
| --volume ${{ github.workspace }}/${PR}:${WORKDIR} \ | |
| --volume ${{ github.workspace }}/mobb-data:${MOBB_DATA} \ | |
| --env OMPI_ALLOW_RUN_AS_ROOT=1 \ | |
| --env OMPI_ALLOW_RUN_AS_ROOT_CONFIRM=1 \ | |
| --env MOBB_DATA=${MOBB_DATA} \ | |
| --env ATLAS_DATA_PATH=${MOBB_DATA} \ | |
| --env LFRICJEDI_TEST_TIER=0 \ | |
| --workdir=${WORKDIR} \ | |
| --entrypoint=${WORKDIR}/build-and-test.sh \ | |
| 'ngmssboxjediacr.azurecr.io/jedibase:alma9' | |
| - name: Cleanup workspace | |
| working-directory: ${{github.workspace}} | |
| run: rm -fr ${{ env.PR }} || true |