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e58aeab
added first draft for RateSystem
raphael-roemer Oct 8, 2024
c7d44b1
Merge branch 'main' into RateSystem
oameye Oct 10, 2024
c71f1b4
Merge branch 'main' into RateSystem
reykboerner Oct 16, 2024
525c6a1
incorporated RateSystem file
reykboerner Oct 16, 2024
4e8366c
small typo fix
reykboerner Oct 16, 2024
727740f
undid wrong fix
reykboerner Oct 16, 2024
3acaddb
Removed RateSystem Lines
raphael-roemer Mar 19, 2025
cae20d6
Merge branch 'main' into RateSystem
raphael-roemer Mar 19, 2025
d32c1c5
Return RateSystem changes
raphael-roemer Mar 19, 2025
5ee2ed9
Again delete Rate stuff
raphael-roemer Mar 19, 2025
444eb72
Include Rate stuff again
raphael-roemer Mar 19, 2025
b8f145a
added new RateSystem Version
raphael-roemer Mar 19, 2025
f8230d7
Compressed RateSystemDraft2.jl script, created RateSystemTestsDraft.j…
ryandeeley Mar 19, 2025
320fa82
Corrected src/CriticalTransitions.jl file.
ryandeeley Mar 19, 2025
189f62b
Moved contents of dev/ file to test/ file and reset src/CriticalTrans…
ryandeeley Mar 19, 2025
bba545b
Collected all old and new RateSystem scripts into the test/ratesystem…
ryandeeley Mar 19, 2025
dcaf8aa
yep
ryandeeley Mar 20, 2025
650b6fa
Added PolynomialRoots to dependencies.
ryandeeley Mar 20, 2025
f6d97e3
See previous.
ryandeeley Mar 20, 2025
3febe82
See previous again.
ryandeeley Mar 20, 2025
8e0a7b3
Exported truscottbrindley-mod-gen-det function.
ryandeeley Mar 20, 2025
e2f006e
Removed CoupledODEs functionality from systems/ folder.
ryandeeley Mar 20, 2025
74ba1ae
Removed the system I added.
ryandeeley Mar 20, 2025
5786d48
Merge branch 'main' into RateSystem
reykboerner Jun 3, 2025
6e57725
Merge branch 'main' into RateSystem
oameye Jun 13, 2025
bdd468e
Starting a RateSystem Example
raphael-roemer Jun 28, 2025
020b80f
work on example of RateSystem
raphael-roemer Jun 29, 2025
894945b
work on example of RateSystem
raphael-roemer Jun 29, 2025
af0efc4
work on example of RateSystem
raphael-roemer Jun 29, 2025
9e1f68d
work on example of RateSystem
raphael-roemer Jun 29, 2025
d3c9ece
added documentation in RateSystem file
raphael-roemer Jun 29, 2025
12d4a01
Merge branch 'main' into RateSystem
raphael-roemer Jun 30, 2025
e3d2156
corrected mistake in RateSystem file
raphael-roemer Jun 30, 2025
90f4228
improved documentation of test2
raphael-roemer Jun 30, 2025
1703378
work on the example for RateSystem
raphael-roemer Jun 30, 2025
2a5619e
added codes for the RateSystem example
raphael-roemer Jun 30, 2025
260e18f
correction in MaierStein example
raphael-roemer Jun 30, 2025
64d775c
small corrections in Test and RateSystemDraft
raphael-roemer Jul 22, 2025
cdd41f4
addition to RateSystem example
raphael-roemer Jul 22, 2025
cbe4abe
additions to RateSystem example
raphael-roemer Jul 22, 2025
6ab08ec
additions to RateSystem example
raphael-roemer Jul 22, 2025
c47fdd4
correction in RateSystem example
raphael-roemer Jul 22, 2025
5266412
correction in RateSystem.jl
raphael-roemer Jul 22, 2025
12ab98f
added RateSystem.md to pages.jl
raphael-roemer Jul 23, 2025
f13cd91
Merge branch 'main' into RateSystem
reykboerner Jul 24, 2025
e9f90c8
moved RateSystem source code to src
reykboerner Jul 24, 2025
14a97d6
applied formatter, fixed typo, disabled spell check until PR review
reykboerner Jul 24, 2025
f8d73ef
remove CairoMakie dep
reykboerner Jul 25, 2025
cf5afb2
added RateSystem test
reykboerner Jul 25, 2025
e7f8580
small fix
reykboerner Jul 25, 2025
063b84b
applied Formatter
reykboerner Jul 25, 2025
1feff1a
small edits in docs and added docstring drafts
reykboerner Jul 25, 2025
4e0ab57
deleted test/ratesystem/RateSystem.jl
raphael-roemer Jul 28, 2025
41128cc
deleted test/ratesystem/RateSystemDraft1.jl and test/ratesystem/RateS…
raphael-roemer Jul 28, 2025
2dcffc8
deleted test/ratesystem
raphael-roemer Jul 28, 2025
00f0ef2
deleted examples/RateSystem.jl
raphael-roemer Jul 28, 2025
729ea5f
expanded documentaation of RateSystem
raphael-roemer Jul 28, 2025
648c863
expanded documentation
raphael-roemer Jul 28, 2025
b147beb
added plot of parameter shift in RateSystem documentation
raphael-roemer Jul 28, 2025
79715af
deleted NLPModelsIpopt from project.toml
raphael-roemer Jul 28, 2025
eb43377
fixed error in Project.toml
raphael-roemer Jul 28, 2025
4cdbd7d
fixed quotation marks in quickstart.md
raphael-roemer Jul 28, 2025
db71cb3
removed the ! from apply_ramping
raphael-roemer Jul 28, 2025
923849d
fixed error in documentation of RateSystem
raphael-roemer Jul 28, 2025
8634b8d
resolving documentation issue with RateProtocol-plot
raphael-roemer Jul 28, 2025
1c0999d
improved documentation of apply_ramping
raphael-roemer Jul 28, 2025
44f11fb
correction in tes of RaateSystem
raphael-roemer Jul 28, 2025
722cc74
corrected typo in RateProtocol docstring
raphael-roemer Jul 29, 2025
345865f
added plot of lambda to example of RateSystem
raphael-roemer Jul 29, 2025
a6e8029
removed unnecessary formatting information and improved beginning of …
raphael-roemer Jul 29, 2025
3c94279
correction in docstring
raphael-roemer Jul 29, 2025
5f1f6bc
recovered docs/Project.toml
reykboerner Jul 29, 2025
ef73286
updated .toml and applied Formatter
reykboerner Jul 29, 2025
7656282
Merge branch 'main' into r-tipping_functionality
ryandeeley Jul 29, 2025
7b79902
added source files
reykboerner Jul 29, 2025
be7aca8
added moving_sinks draft
reykboerner Jul 31, 2025
35b6c30
apply formatter and enable spelling again
oameye Aug 1, 2025
c354813
Merge branch 'main' into r-tipping_functionality
oameye Aug 1, 2025
92740dc
Added draft version of the critical_rate function.
ryandeeley Aug 1, 2025
f84b031
Merge branch 'main' into r-tipping_functionality
oameye Aug 2, 2025
f65f61d
Slight corrections to align with how fixed_points works.
ryandeeley Aug 3, 2025
4243f90
Made corrections to the critical_rate function in the process of gett…
ryandeeley Aug 3, 2025
eea5bb5
Slight corrections to align with how fixed_points works.
ryandeeley Aug 3, 2025
0a68506
Merge branch 'main' into r-tipping_functionality
reykboerner Aug 6, 2025
7b77fc0
fixed docs error
reykboerner Aug 6, 2025
a55936f
delete deprecated files
reykboerner Nov 4, 2025
722a458
Merge branch 'main' into r-tipping_functionality
reykboerner Nov 4, 2025
304e2ca
update moving_sinks, fix spelling and bump version
reykboerner Nov 4, 2025
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36 changes: 36 additions & 0 deletions src/r_tipping/moving_sinks.jl
Original file line number Diff line number Diff line change
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"""
moving_sinks(ds::ContinuousTimeDynamicalSystem, rp::RateProtocol, box; kwargs...)

Calculates fixed points of a nonautonomous dynamical system at snapshots in time, giving
insight into how the equilibria change as the forcing changes over time.

## Input
`ds` is a dynamical system of type `ContinuousTimeDynamicalSystem`, `rp` a `RateProtocol`,
and `box` is a vector of intervals (e.g. `[interval(0,1), interval(-1,1)]`)
that delimits the phase space volume in which to look for equilibria
(see [`fixedpoints`](@ref)).

## Keyword arguments
- `times = 0:0.1:1`: time points (relative to the system time `t`)

## output
Returns a triple of vectors:
1. Fixed points found at each time point
2. Eigenvalues associated with the fixed points
3. Stability of the fixed points (1 - stable; 0 - unstable)

The term "moving sinks" refers to Wieczorek et al. (2023).
"""
function moving_sinks(ds::ContinuousTimeDynamicalSystem, rp::RateProtocol, box;
times=0:0.1:1)

fp, eig, stab = [], [], []
for t in times
rate_sys = apply_ramping(ds, rp, t)
_fp, _eig, _stab = fixedpoints(rate_sys, box)
push!(fp, _fp)
push!(eig, _eig)
push!(stab, _stab)
end
return fp, eig, stab
end
30 changes: 30 additions & 0 deletions test/r_tipping/moving_sinks.jl
Original file line number Diff line number Diff line change
@@ -0,0 +1,30 @@

@testset "moving_sinks" begin
using ChaosTools
# Dynamical system
function fhn(u,p,t)
eps, b = p
x, y = u
dx = (-x^3 + x - y)/eps
dy = -b*y + x
return SA[dx, dy]
end

p = [1,6]
sys = CoupledODEs(fhn, [1.,1], p)

# Forcing
function λ(p, t)
λ_max = p[2]
lambda = (λ_max/2)*(tanh(λ_max*t/2)+1)
return SVector{2}([p[1], lambda])
end

r = 0.1
rp = CriticalTransitions.RateProtocol(λ, p, r, -10, 10)

# Calculate moving sinks
box = [interval(-2,2), interval(-1,1)]
fp, eig, stab = moving_sinks(sys, rp, box; times=0:0.1:1)
@test length(fp[1]) == 3
end
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