Merge pull request #162 from KPMP/KPMP-6545_Biopsy_Tracking_Tableau

Kpmp 6545 biopsy tracking tableau

Author: zwright

data_management/services/tableau.py

@@ -15,6 +15,12 @@ def truncate_biopsy_tracking(self):
         )
         return result
 
+    def truncate_biopsy_tracking_long(self):
+        result = self.db_tableau.get_data(
+            "truncate table biopsy_tracking_long"
+        )
+        return result
+
     def truncate_data_manager_data(self):
         result = self.db_tableau.get_data(
             "truncate table data_manager_data"
@@ -34,7 +40,7 @@ def load_biopsy_tracking(self):
     def load_biopsy_tracking_long(self):
         self.truncate_biopsy_tracking_long()
         bt_results = self.dlu_management.get_biopsy_tracking_long()
-        query = "INSERT INTO biopsy_tracking_long(redcap_id, specimen_id, dlu_packageType, status) VALUES(%s, %s, %s, %s)"
+        query = "INSERT INTO biopsy_tracking_long(redcap_id, specimen_id, dlu_tis, dlu_packageType, status) VALUES(%s, %s, %s, %s, %s)"
         records_modified = 0
         for result in bt_results:
             self.db_tableau.insert_data(query, tuple(result.values()))

data_management/sql/biopsy_tracking_long.sql

@@ -2,6 +2,7 @@ CREATE TABLE biopsy_tracking_long
 (
     redcap_id       varchar(100) NULL,
     specimen_id     varchar(100) NULL,
+    dlu_tis         varchar(100) NULL,
     dlu_packageType varchar(100) NULL,
     status          varchar(100) NULL
 ) ENGINE=InnoDB