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geogav opened this issue Apr 10, 2024 · 1 comment
Open

Unable to run the ATACseq notebook #13

geogav opened this issue Apr 10, 2024 · 1 comment

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@geogav
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geogav commented Apr 10, 2024

Hello, I am trying to recreate the https://github.com/LiuLab-Bioelectronics-Harvard/UnitedNet/blob/main/notebooks/ATACSeq.ipynb and I am getting an error at the stage of

model.train(adatas_train, verbose=True)

The error I am getting says this: ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all()

I am attaching the relevant snapshot. I have successfully completed the DLPFC notebook and never had a similar issue. I am running UnitedNet on a GPU-equipped Colab.
Screenshot 2024-04-10 at 5 51 01 PM

The data that I am trying to load were retrieved from your zenodo link: https://zenodo.org/records/7708592#.ZBSIp3Yo9aQ

Thank you in advance!
GG

@0Seven-Deadly-Sins
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change the array into list,it is a common problem of tabulate()

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