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Pavlidis lab

The Pavlidis Lab at the University of British Columbia

14 followers
Vancouver, British Columbia, Canada
https://pavlab.msl.ubc.ca

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neuroexpresso neuroexpresso Public

📊 Gene expression in neuroexpresso database

R 18 1
Gemma Gemma Public

Genomics data re-analysis

Java 23 6
markerGeneProfile markerGeneProfile Public

Marker gene profile estimation method used in NeuroExpresso manuscript

R 14 2

Repositories

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Showing 10 of 67 repositories

Gemma Public
Genomics data re-analysis

PavlidisLab/Gemma’s past year of commit activity

Java 23 Apache-2.0 6 324 30 Updated May 31, 2025
GemBrow Public
The Gemma Browser

PavlidisLab/GemBrow’s past year of commit activity

Vue 4 Apache-2.0 1 31 1 Updated May 30, 2025
gemma.R Public
An R wrapper for the Gemma RESTful API

PavlidisLab/gemma.R’s past year of commit activity

R 10 Apache-2.0 1 9 0 Updated May 28, 2025
gemmapy Public

PavlidisLab/gemmapy’s past year of commit activity

Python 6 Apache-2.0 1 9 2 Updated May 28, 2025
gsec Public
Reusable implementation of the Spring Security framework for lab projects

PavlidisLab/gsec’s past year of commit activity

Java 0 Apache-2.0 0 3 6 Updated May 15, 2025
pavlab-starter-parent Public
Curated dependencies for the Pavlidis Lab's Java applications

PavlidisLab/pavlab-starter-parent’s past year of commit activity

0 Apache-2.0 0 7 1 Updated May 12, 2025
baseCode Public
Data structures, math and statistics tools, and utilities that are often needed across projects.

PavlidisLab/baseCode’s past year of commit activity

Java 5 Apache-2.0 0 3 2 Updated May 12, 2025
sc-annotation-pipeline Public

PavlidisLab/sc-annotation-pipeline’s past year of commit activity

Python 0 0 5 0 Updated May 11, 2025
aggtools Public

PavlidisLab/aggtools’s past year of commit activity

R 0 0 1 0 Updated Apr 29, 2025
rnaseq-pipeline Public
RNA-seq pipeline for raw sequence alignment and transcript/gene quantification.

PavlidisLab/rnaseq-pipeline’s past year of commit activity

Shell 24 Unlicense 5 31 1 Updated Apr 28, 2025

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