Skip to content

Problem with kaiju2anvio.R #1

@Rfranco-duarte

Description

@Rfranco-duarte

Hi
I am running intro an error when running kaiju2anvio.R script after kaiju taxonomic assignment.
The error is the following:

Loading required package: parallel
Error in `[.data.frame`(kaiju.names, , 2) : undefined columns selected
Calls: kaiju2mat -> cbind -> as.matrix -> [ -> [.data.frame
Execution halted

Any help would be appreciated.

Thanks.

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions