v3.8.0

v3.8.0 (2019-06-13)

Diff since v3.7.2

Closed issues:

• Register (#127)
• Add keywords on Github (#121)
• addjumps! for large systems (#115)
• stoichiometric matrix as alternative input (#78)

Merged pull requests:

• add a project toml (#126) (ChrisRackauckas)
• drop giving jacobian function an explicit name (#124) (isaacsas)
• Sparse Jacobian support (#123) (isaacsas)
• [skip ci] reactivate codecov and update README (#122) (isaacsas)
• refactorings (#120) (isaacsas)
• Update readme (#119) (isaacsas)

test for network equality and new API accessor functions

Merge pull request #118 from isaacsas/export-new-API-funcs

export symstoich functions

faster incremental network construction

Merge pull request #116 from isaacsas/faster-recursive-content

further optimize addreaction! for large systems

incremental network construction

Merge pull request #113 from isaacsas/incremental-model-construction

Incremental model construction

more query functions and API documentation

Merge pull request #111 from isaacsas/doc-updates

Doc updates

more efficient generated ODE functions

Added @inbounds and cleaned extraneous operations.

fix small memory allocations

Merge pull request #99 from isaacsas/f-allocations-check

return nothing in ODE/SDE functions

Fix syms in plots

Merge pull request #96 from isaacsas/discretefunction-fix

DiscreteFunction creation fix

ODE and Parameter Jacobians

Merge pull request #94 from isaacsas/appveyor-fix

allow failures on appveyor for Julia nightly

label species in plots and prevent negative sqrt in SDEs

Merge pull request #90 from isaacsas/use-discretefunctions

add DiscreteProblem overload for reaction_networks