Merge remote-tracking branch 'origin/main' into breaking

Author: penelopeysm

.github/workflows/Enzyme.yml

@@ -0,0 +1,35 @@
+name: Enzyme on demo models
+
+on:
+  push:
+    branches:
+      - main
+  pull_request:
+
+# needed to allow julia-actions/cache to delete old caches that it has created
+permissions:
+  actions: write
+  contents: read
+
+# Cancel existing tests on the same PR if a new commit is added to a pull request
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref || github.run_id }}
+  cancel-in-progress: ${{ startsWith(github.ref, 'refs/pull/') }}
+
+jobs:
+  enzyme:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: julia-actions/setup-julia@v2
+        with:
+          version: "1"
+
+      - uses: julia-actions/cache@v2
+
+      - name: Run AD with Enzyme on demo models
+        working-directory: test/integration/enzyme
+        run: |
+          julia --project=. --color=yes -e 'using Pkg; Pkg.instantiate()'
+          julia --project=. --color=yes main.jl

HISTORY.md

@@ -18,6 +18,11 @@ This release overhauls how VarInfo objects track variables such as the log joint
   - `getlogp` now returns a `NamedTuple` with keys `logprior` and `loglikelihood`. If you want the log joint probability, which is what `getlogp` used to return, use `getlogjoint`.
   - Correspondingly `setlogp!!` and `acclogp!!` should now be called with a `NamedTuple` with keys `logprior` and `loglikelihood`. The `acclogp!!` method with a single scalar value has been deprecated and falls back on `accloglikelihood!!`, and the single scalar version of `setlogp!!` has been removed. Corresponding setter/accumulator functions exist for the log prior as well.
 
+## 0.36.12
+
+Removed several unexported functions.
+The only notable one is `DynamicPPL.alg_str`, which was used in old versions of AdvancedVI and the Turing test suite.
+
 ## 0.36.11
 
 Make `ThreadSafeVarInfo` hold a total of `Threads.nthreads() * 2` logp values, instead of just `Threads.nthreads()`.

docs/make.jl

@@ -24,9 +24,7 @@ makedocs(;
     format=Documenter.HTML(; size_threshold=2^10 * 400),
     modules=[DynamicPPL, Base.get_extension(DynamicPPL, :DynamicPPLMCMCChainsExt)],
     pages=[
-        "Home" => "index.md",
-        "API" => "api.md",
-        "Internals" => ["internals/varinfo.md", "internals/submodel_condition.md"],
+        "Home" => "index.md", "API" => "api.md", "Internals" => ["internals/varinfo.md"]
     ],
     checkdocs=:exports,
     doctest=false,