What's Changed
New features
- New script
plot_diff_coeff_salt_per_chain.py
to plot the center-of-mass self-diffusion coefficients of Li, TFSI and PEO as function of the number of lithium ions per PEO chain by @andthum in #70 plot_lig_change_at_pos_change_blocks_*.py
: Set a common upper limit for the y axis of the plot of the number of valid barrier transitions by @andthum in #71plot_hex_bin_lifetimes_conc_dependence.py
: Additionally, plot characteristics of the residence time distribution by @andthum in #72plot_displvar_layer_vs_time.py
andplot_displvar_cross_section_xyz_at_const_time.py
: Additionally, plot the true MSD by @andthum in #73plot_displvar_cross_section_at_const_time_*.py
: Implement common y axis limits by @andthum in #75- New script
plot_volume_per_salt_conc_dependence.py
to plot the time-averaged total volume of the system divided by the total number of salt formula units as function of the inverse salt concentration by @andthum in #80 plot_contact_hist_*.py
: Additionally, plot the average denticity of lithium-ligand complexes and the denticity distribution by @andthum in #90
Bug fixes
plot_renewal_event_num_*.py
: Fix a type casting bug in the calculation of the number of renewal events per reference compound in bulk simulations by @andthum in #83plot_free-energy_trans_rate_*_cluster.py
: Add missing beta in the expression for the Boltzmann weight for
calculating the transition rates from the barrier heights by @andthum in #87
Full Changelog: v0.5.0...v0.6.0