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Pull requests: aqlaboratory/openfold

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Pull requests list

Add multiprocessing, relaxation_device options
#551 opened Aug 25, 2025 by psohani Loading…
Bump actions/checkout from 4 to 5 dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code
#550 opened Aug 12, 2025 by dependabot bot Loading…
High-level diagrams for openfold's codebase
#543 opened Jul 4, 2025 by ivanmilevtues Loading…
3
Explicitly set reentrant to False for torch checkpointing
#528 opened Mar 31, 2025 by an1lam Loading…
1
Feat/cyclic offset
#526 opened Mar 22, 2025 by ioannisa92 Loading…
Update PDB download link
#507 opened Nov 18, 2024 by davidsimon Loading…
fix: set numpy and deepspeed dependency versions
#503 opened Nov 13, 2024 by etowahadams Loading…
2
Update run_pretrained_openfold.py
#493 opened Oct 12, 2024 by Lix1993 Loading…
fix typo in config.py
#487 opened Sep 14, 2024 by Lix1993 Loading…
Bug Fix: Preserve full FASTA ID in alignment directory parsing to prevent truncation errors
#485 opened Sep 7, 2024 by juliocesar-io Loading…
OpenFold Local Jupyter Notebook 📔 | Metrics, Plots, Concurrent Inference
#484 opened Aug 28, 2024 by juliocesar-io Loading…
Fix for docs on deepspeed inference
#482 opened Aug 26, 2024 by josemduarte Loading…
@christinaflo @ljarosch
3
Update Inference.md - missing backslash
#478 opened Aug 23, 2024 by vaclavhanzl Loading…
Remove manual -std=c++14 flag for compatibility
#450 opened May 29, 2024 by jnooree Loading…
Fixes and improvements to the installation instructions
#447 opened May 21, 2024 by jkosinski Loading…
1
added threading and Colabfold-like plots generation
#442 opened May 16, 2024 by jflucier Loading…
OS.Environ for LMA default chunk_sizes
#435 opened Apr 29, 2024 by jyaacoub Loading…
Fix atom37_to_atom14 tensor shape errors in all_atom_multimer.py
#430 opened Apr 23, 2024 by amorehead Loading…
Refactor shell setup code & update CUDA build
#425 opened Mar 29, 2024 by afairley Loading…
Fix periodicity batching bug for supervised_chi_loss in loss.py
#382 opened Dec 8, 2023 by amorehead Loading…
Fix typos and clarify wording in residue_constants.py
#347 opened Sep 13, 2023 by amorehead Loading…
Update uniref download link
#332 opened Jun 28, 2023 by empyriumz Loading…
Improve comments
#328 opened Jun 16, 2023 by kfeng123 • Draft
ProTip! What’s not been updated in a month: updated:<2025-08-03.