Skip to content

Commit b4a3f7a

Browse files
committed
updated docker images version for mash based components
1 parent a9bf44e commit b4a3f7a

File tree

2 files changed

+6
-5
lines changed

2 files changed

+6
-5
lines changed

changelog.md

Lines changed: 3 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -7,7 +7,7 @@
77
- Added new `recipe` system to flowcraft along with 6 starting recipes.
88
Recipes are pre-made and curated pipelines that address specific questions.
99
To create a recipe, the `-r <recipe_name>` can be used. To list available
10-
recipes, the `--recipe-list` and `--recipe-list-short` options were added.
10+
recipes, the `--recipe-list` and `--recipe-list-short` options were added.
1111

1212
### Components changes
1313

@@ -16,7 +16,8 @@ resolution
1616
- The `abyss` and `spades` components emit GFA in a secondary channel.
1717
- The new `bandage` component can accept either FASTA from a primary channel
1818
or GFA from a secondary channel.
19-
- Updated skesa to version 2.3.0
19+
- Updated skesa to version 2.3.0.
20+
- Updated mash based components for the latest version - 1.6.0-1.
2021

2122
### New components
2223

flowcraft/generator/components/distance_estimation.py

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -103,13 +103,13 @@ def __init__(self, **kwargs):
103103
self.directives = {
104104
"mashScreen": {
105105
"container": "flowcraft/mash-patlas",
106-
"version": "1.5.2-1",
106+
"version": "1.6.0-1",
107107
"cpus": 1,
108108
"memory": "{ 4.GB * task.attempt }"
109109
},
110110
"mashOutputJson": {
111111
"container": "flowcraft/mash-patlas",
112-
"version": "1.5.2-1",
112+
"version": "1.6.0-1",
113113
"cpus": 1,
114114
"memory": "'4GB'"
115115
}
@@ -154,7 +154,7 @@ def __init__(self, **kwargs):
154154
self.directives = {
155155
"mashSketchFasta": {
156156
"container": "flowcraft/mash-patlas",
157-
"version": "1.4.1",
157+
"version": "1.6.0-1",
158158
"cpus": 1,
159159
"memory": "{ 4.GB * task.attempt }"
160160
},

0 commit comments

Comments
 (0)