diff --git a/flowcraft/generator/components/reads_quality_control.py b/flowcraft/generator/components/reads_quality_control.py
index 6e029956..d97dadb3 100644
--- a/flowcraft/generator/components/reads_quality_control.py
+++ b/flowcraft/generator/components/reads_quality_control.py
@@ -230,7 +230,7 @@ def __init__(self, **kwargs):
             "cpus": 2,
             "memory": "{ 4.GB * task.attempt }",
             "container": "flowcraft/trimmomatic",
-            "version": "0.36-1"
+            "version": "0.39-1"
         }}
 
 
@@ -322,7 +322,7 @@ def __init__(self, **kwargs):
                 "cpus": 2,
                 "memory": "{ 4.GB * task.attempt }",
                 "container": "flowcraft/trimmomatic",
-                "version": "0.36-1"
+                "version": "0.39-1"
             }
         }