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Control 5 columns genbank files quality

pablopareja edited this page Jun 16, 2011 · 3 revisions

Arguments for this program:

  1. Annotation XML file
  2. 5 columns TBL file
  3. Prefix used in TBL file

Implemented controls include the following:

  • Every contig included in the annotation file should also be included in the tbl file
  • Every gene and rna included in the annotation file should also be included in the tbl file (in the appropriate contig table)
  • Gene/rna positions/strand specified in the annotation XML file must correspond with those included in the tbl file
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