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Predict genes

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rtobes edited this page Aug 29, 2011 · 4 revisions

This is one of the most important programs/steps on the semi-automatic annotation process. It carries out the gene prediction phase of the process. The jar file can be downloaded here

Arguments for the program:

  1. BlastOutput XML filename
  2. Contigs FNA filename
  3. Output results XML filename
  4. Extension_theshold (integer)
  5. Virus_flag (boolean) indicating if this genome corresponds to a virus (true/false)
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