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pablopareja edited this page Mar 10, 2011
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This is one of the most important programs/steps on the semi-automatic annotation process. It carries out the gene prediction phase of the process. The jar file can be downloaded [[here|https://github.com/pablopareja/SemiautomaticGeneAnnotation/raw/master/jars/PredictGenes.jar
Arguments for the program:
BlastOutput XML filename
Contigs FNA filename
Output results XML filename
Maximum gene length (integer)
Flag (boolean) indicating if this genome corresponds to a virus (true/false)