Skip to content
pablopareja edited this page Mar 10, 2011 · 4 revisions

This is one of the most important programs/steps on the semi-automatic annotation process. It carries out the gene prediction phase of the process. The jar file can be downloaded [[here|https://github.com/pablopareja/SemiautomaticGeneAnnotation/raw/master/jars/PredictGenes.jar

Arguments for the program:

  1. BlastOutput XML filename
  2. Contigs FNA filename
  3. Output results XML filename
  4. Maximum gene length (integer)
  5. Flag (boolean) indicating if this genome corresponds to a virus (true/false)
Clone this wiki locally