Skip to content

Commit c4d16d3

Browse files
committed
feat: Add example with all ways of calculating TotalReadoutTime
1 parent f213067 commit c4d16d3

15 files changed

+43
-0
lines changed

fmaps/README.md

Lines changed: 8 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,8 @@
1+
# EPI fieldmap metadata test
2+
3+
The total readout time is necessary to translate between deflections
4+
in the magnetic field and displacements induced by susceptibility artifacts.
5+
6+
There are several ways to calculate the total readout time, given a BIDS
7+
dataset, and this example exists to demonstrate them.
8+
In particular this dataset SHOULD NOT emit `TOTAL_READOUT_TIME_MUST_DEFINE` errors.

fmaps/dataset_description.json

Lines changed: 4 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,4 @@
1+
{
2+
"BIDSVersion": "1.10.0",
3+
"Name": "EPI fieldmap metadata test"
4+
}
Lines changed: 4 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,4 @@
1+
{
2+
"PhaseEncodingDirection": "j",
3+
"EffectiveEchoSpacing": 0.00059
4+
}

fmaps/sub-01/fmap/sub-01_acq-EES_dir-AP_epi.nii

Whitespace-only changes.
Lines changed: 5 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,5 @@
1+
{
2+
"PhaseEncodingDirection": "j",
3+
"EchoSpacing": 0.00059,
4+
"ParallelReductionFactorInPlane": 2
5+
}

fmaps/sub-01/fmap/sub-01_acq-ES_dir-AP_epi.nii

Whitespace-only changes.
Lines changed: 6 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,6 @@
1+
{
2+
"PhaseEncodingDirection": "j",
3+
"WaterFatShift": 9.227266,
4+
"EPIFactor": 35,
5+
"ImagingFrequency": 127.7325
6+
}

fmaps/sub-01/fmap/sub-01_acq-Freq_dir-AP_epi.nii

Whitespace-only changes.

fmaps/sub-01/fmap/sub-01_acq-NoData_dir-AP_epi.nii

Whitespace-only changes.
Lines changed: 6 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,6 @@
1+
{
2+
"PhaseEncodingDirection": "j",
3+
"WaterFatShift": 9.227266,
4+
"EPIFactor": 35,
5+
"MagneticFieldStrength": 3
6+
}

fmaps/sub-01/fmap/sub-01_acq-Strength_dir-AP_epi.nii

Whitespace-only changes.
Lines changed: 4 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,4 @@
1+
{
2+
"PhaseEncodingDirection": "j",
3+
"TotalReadoutTime": 0.05
4+
}

fmaps/sub-01/fmap/sub-01_acq-TRT_dir-AP_epi.nii

Whitespace-only changes.
Lines changed: 6 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,6 @@
1+
{
2+
"TaskName": "rest",
3+
"PhaseEncodingDirection": "j",
4+
"TotalReadoutTime": 0.05,
5+
"RepetitionTime": 2
6+
}

fmaps/sub-01/func/sub-01_task-rest_bold.nii

Whitespace-only changes.

0 commit comments

Comments
 (0)