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1 parent 6becbef commit 644cbfaCopy full SHA for 644cbfa
.github/workflows/python-app.yml
@@ -47,3 +47,8 @@ jobs:
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- name: Test percolator ms2rescore
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run: |
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rescoring ms2rescore --psm_file TMT_Erwinia_1uLSike_Top10HCD_isol2_45stepped_60min_01_comet.idXML --spectrum_path TMT_Erwinia_1uLSike_Top10HCD_isol2_45stepped_60min_01.mzML --processes 2 --ms2pip_model HCD2021 --feature_generators 'ms2pip,deeplc' --id_decoy_pattern ^rev --test_fdr 0.05
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+ - name: Upload coverage reports to Codecov
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+ uses: codecov/codecov-action@v5
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+ with:
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+ token: ${{ secrets.CODECOV_TOKEN }}
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+ slug: bigbio/quantms-rescoring
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