chore: updating to BioSimulators-utils 0.1.96

Author: jonrkarr

biosimulators_bionetgen/core.py

@@ -13,7 +13,7 @@
 from .warnings import IgnoredBnglFileContentWarning
 from biosimulators_utils.combine.exec import exec_sedml_docs_in_archive
 from biosimulators_utils.log.data_model import CombineArchiveLog, TaskLog  # noqa: F401
-from biosimulators_utils.plot.data_model import PlotFormat  # noqa: F401
+from biosimulators_utils.viz.data_model import VizFormat  # noqa: F401
 from biosimulators_utils.report.data_model import ReportFormat, VariableResults  # noqa: F401
 from biosimulators_utils.sedml import validation
 from biosimulators_utils.sedml.data_model import (Task, ModelLanguage, ModelAttributeChange,  # noqa: F401
@@ -41,7 +41,7 @@ def exec_sedml_docs_in_combine_archive(archive_filename, out_dir,
               with reports at keys ``{ relative-path-to-SED-ML-file-within-archive }/{ report.id }`` within the HDF5 file
 
         report_formats (:obj:`list` of :obj:`ReportFormat`, optional): report format (e.g., csv or h5)
-        plot_formats (:obj:`list` of :obj:`PlotFormat`, optional): report format (e.g., pdf)
+        plot_formats (:obj:`list` of :obj:`VizFormat`, optional): report format (e.g., pdf)
         bundle_outputs (:obj:`bool`, optional): if :obj:`True`, bundle outputs into archives for reports and plots
         keep_individual_outputs (:obj:`bool`, optional): if :obj:`True`, keep individual output files
 

requirements.txt

@@ -1,3 +1,3 @@
-biosimulators_utils[bngl,logging] >= 0.1.95
+biosimulators_utils[bngl,logging] >= 0.1.96
 kisao
 pandas