new parent image (#44)

* new parent image

* adds xgboost, and lightgbm

Author: FelixKirschKern

Dockerfile

@@ -1,7 +1,7 @@
-FROM kernai/refinery-parent-images:v1.12.2-torch-cpu
+FROM kernai/refinery-parent-images:v1.13.0-torch-cpu
 
 RUN apt-get update && \
-    apt-get install --no-install-recommends -y curl && \
+    apt-get install --no-install-recommends -y curl libgomp1 && \
     rm -rf /var/lib/apt/lists/*
 
 COPY requirements.txt .

requirements.txt

@@ -68,17 +68,21 @@ joblib==1.3.2
     #   -r requirements/torch-cpu-requirements.txt
     #   scikit-learn
     #   scikit-optimize
+lightgbm==4.1.0
+    # via -r requirements/requirements.in
 minio==7.1.12
     # via -r requirements/torch-cpu-requirements.txt
 numpy==1.23.4
     # via
     #   -r requirements/torch-cpu-requirements.txt
+    #   lightgbm
     #   pandas
     #   scikit-learn
     #   scikit-optimize
     #   scipy
     #   sequencelearn
     #   transformers
+    #   xgboost
 packaging==23.1
     # via
     #   -r requirements/torch-cpu-requirements.txt
@@ -138,9 +142,11 @@ scikit-optimize==0.9.0
 scipy==1.11.2
     # via
     #   -r requirements/torch-cpu-requirements.txt
+    #   lightgbm
     #   scikit-learn
     #   scikit-optimize
     #   sequencelearn
+    #   xgboost
 sequencelearn==0.0.9
     # via -r requirements/requirements.in
 six==1.16.0
@@ -183,11 +189,13 @@ typing-extensions==4.8.0
     #   pydantic
     #   starlette
     #   torch
-urllib3==1.26.16
+urllib3==1.26.18
     # via
     #   -r requirements/torch-cpu-requirements.txt
     #   botocore
     #   minio
     #   requests
 uvicorn==0.22.0
     # via -r requirements/torch-cpu-requirements.txt
+xgboost==2.0.1
+    # via -r requirements/requirements.in

requirements/requirements.in

@@ -2,4 +2,6 @@
 #included in base requirements since 1.8.2 because of scikit-optimize
 # scikit-learn==1.2.1
 # scipy==1.9.0 
-sequencelearn==0.0.9
+sequencelearn==0.0.9
+xgboost==2.0.1
+lightgbm==4.1.0

requirements/torch-cpu-requirements.txt

@@ -130,7 +130,7 @@ typing-extensions==4.8.0
     #   pydantic
     #   starlette
     #   torch
-urllib3==1.26.16
+urllib3==1.26.18
     # via
     #   botocore
     #   minio