Ruff: EXE001 shebang-non-executable

dominikatrojanowska · dominikatrojanowska · commit 46ce7dc879c3 · 2025-06-05T13:44:55.000+02:00
diff --git a/mxcubecore/HardwareObjects/Beamline.py b/mxcubecore/HardwareObjects/Beamline.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 #  Project: MXCuBE
diff --git a/mxcubecore/HardwareObjects/ESRF/ESRFSmallXrayCentring.py b/mxcubecore/HardwareObjects/ESRF/ESRFSmallXrayCentring.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 # This file is part of MXCuBE.
diff --git a/mxcubecore/HardwareObjects/Gphl/CollectEmulator.py b/mxcubecore/HardwareObjects/Gphl/CollectEmulator.py
@@ -1,4 +1,3 @@
-# encoding: utf-8
 """Collection emulator, calling an external program to generate data images.
 Written originally for Global Phasing simcal,
 but could be made to work with other systems
diff --git a/mxcubecore/HardwareObjects/Gphl/GphlMessages.py b/mxcubecore/HardwareObjects/Gphl/GphlMessages.py
@@ -1,4 +1,3 @@
-# encoding: utf-8
 """Abstract beamline interface message classes
 
 License:
diff --git a/mxcubecore/HardwareObjects/Gphl/GphlWorkflow.py b/mxcubecore/HardwareObjects/Gphl/GphlWorkflow.py
@@ -1,5 +1,3 @@
-# encoding: utf-8
-
 """Workflow runner, interfacing to external workflow engine
 using Abstract Beamline Interface messages
 
diff --git a/mxcubecore/HardwareObjects/Gphl/GphlWorkflowConnection.py b/mxcubecore/HardwareObjects/Gphl/GphlWorkflowConnection.py
@@ -1,4 +1,3 @@
-# encoding: utf-8
 """Workflow connection, interfacing to external workflow engine
 using py4j and Abstract Beamline Interface messages
 
diff --git a/mxcubecore/HardwareObjects/Gphl/Transcal2MiniKappa.py b/mxcubecore/HardwareObjects/Gphl/Transcal2MiniKappa.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 """
diff --git a/mxcubecore/HardwareObjects/LNLS/read_transmission_mnc.py b/mxcubecore/HardwareObjects/LNLS/read_transmission_mnc.py
@@ -1,4 +1,3 @@
-#!/usr/bin/env python3
 # -*- coding: utf-8 -*-
 
 """Transmission control for MANACA.
diff --git a/mxcubecore/HardwareObjects/XSDataAutoprocv1_0.py b/mxcubecore/HardwareObjects/XSDataAutoprocv1_0.py
@@ -1,5 +1,3 @@
-#!/usr/bin/env python
-
 #
 # Generated Tue Oct 14 03:54::11 2014 by EDGenerateDS.
 #
diff --git a/mxcubecore/HardwareObjects/XSDataCommon.py b/mxcubecore/HardwareObjects/XSDataCommon.py
@@ -1,5 +1,3 @@
-#!/usr/bin/env python
-
 #
 # Generated Tue Jun 21 10:50::49 2011 by EDGenerateDS.
 #
diff --git a/mxcubecore/HardwareObjects/XSDataControlDozorv1_1.py b/mxcubecore/HardwareObjects/XSDataControlDozorv1_1.py
@@ -1,5 +1,3 @@
-#!/usr/bin/env python
-
 #
 # Generated Fri Feb 20 04:42::27 2015 by EDGenerateDS.
 #
diff --git a/mxcubecore/HardwareObjects/XSDataMXCuBEv1_3.py b/mxcubecore/HardwareObjects/XSDataMXCuBEv1_3.py
@@ -1,5 +1,3 @@
-#!/usr/bin/env python
-
 #
 # Generated Mon May 14 10:32::39 2012 by EDGenerateDS.
 #
diff --git a/mxcubecore/HardwareObjects/XSDataMXCuBEv1_4.py b/mxcubecore/HardwareObjects/XSDataMXCuBEv1_4.py
@@ -1,5 +1,3 @@
-#!/usr/bin/env python
-
 #
 # Generated Thu Feb 9 10:58::29 2023 by EDGenerateDS.
 #
diff --git a/mxcubecore/HardwareObjects/XSDataMXv1.py b/mxcubecore/HardwareObjects/XSDataMXv1.py
@@ -1,5 +1,3 @@
-#!/usr/bin/env python
-
 #
 # Generated Tue Mar 28 09:42::39 2023 by EDGenerateDS.
 #
diff --git a/mxcubecore/HardwareObjects/abstract/AbstractXrayCentring.py b/mxcubecore/HardwareObjects/abstract/AbstractXrayCentring.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 # This file is part of MXCuBE.
diff --git a/mxcubecore/HardwareObjects/mockup/ActuatorMockup.py b/mxcubecore/HardwareObjects/mockup/ActuatorMockup.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 #  Project: MXCuBE
diff --git a/mxcubecore/HardwareObjects/mockup/MotorMockup.py b/mxcubecore/HardwareObjects/mockup/MotorMockup.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 #  Project: MXCuBE
diff --git a/mxcubecore/HardwareObjects/mockup/XrayCentringMockup.py b/mxcubecore/HardwareObjects/mockup/XrayCentringMockup.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 # This file is part of MXCuBE.
diff --git a/mxcubecore/model/crystal_symmetry.py b/mxcubecore/model/crystal_symmetry.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 """
diff --git a/mxcubecore/utils/conversion.py b/mxcubecore/utils/conversion.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 # License:
diff --git a/ruff.toml b/ruff.toml
@@ -813,7 +813,6 @@ convention = "google"
     "BLE001",
     "C901",
     "ERA001",
-    "EXE001",
     "FIX002",
     "G002",
     "N999",
@@ -1528,7 +1527,6 @@ convention = "google"
 ]
 "mxcubecore/HardwareObjects/EMBL/EMBLBeamline.py" = [
     "ERA001",
-    "EXE001",
     "F401",
     "N999",
     "RUF012",
@@ -2050,7 +2048,6 @@ convention = "google"
     "E501",
     "EM103",
     "ERA001",
-    "EXE001",
     "FIX002",
     "G001",
     "N802",
@@ -2136,7 +2133,6 @@ convention = "google"
     "PTH207",
 ]
 "mxcubecore/HardwareObjects/ESRF/ESRFSmallXrayCentring.py" = [
-    "EXE001",
     "G001",
     "G002",
     "N806",
@@ -2581,7 +2577,6 @@ convention = "google"
     "C901",
     "EM101",
     "ERA001",
-    "EXE001",
     "FIX002",
     "N806",
     "N814",
@@ -2613,7 +2608,6 @@ convention = "google"
     "E722",
     "EM101",
     "ERA001",
-    "EXE001",
     "FBT002",
     "N802",
     "N803",
@@ -2646,7 +2640,6 @@ convention = "google"
     "E722",
     "EM101",
     "ERA001",
-    "EXE001",
     "FBT002",
     "FIX002",
     "G002",
@@ -2694,7 +2687,6 @@ convention = "google"
     "E722",
     "EM101",
     "ERA001",
-    "EXE001",
     "F401",
     "F811",
     "FBT002",
@@ -2733,7 +2725,6 @@ convention = "google"
     "ARG001",
     "C400",
     "E722",
-    "EXE001",
     "N999",
     "PERF401",
     "PLR0913",
@@ -3029,7 +3020,6 @@ convention = "google"
 "mxcubecore/HardwareObjects/LNLS/read_transmission_mnc.py" = [
     "E501",
     "ERA001",
-    "EXE001",
     "F841",
     "N806",
     "Q000",
@@ -4719,7 +4709,6 @@ convention = "google"
     "C901",
     "E501",
     "ERA001",
-    "EXE001",
     "F601",
     "N802",
     "N803",
@@ -4753,7 +4742,6 @@ convention = "google"
     "C901",
     "E501",
     "ERA001",
-    "EXE001",
     "N802",
     "N803",
     "N805",
@@ -4776,7 +4764,6 @@ convention = "google"
     "C901",
     "E501",
     "ERA001",
-    "EXE001",
     "F601",
     "N802",
     "N803",
@@ -4808,7 +4795,6 @@ convention = "google"
     "C901",
     "E501",
     "ERA001",
-    "EXE001",
     "F601",
     "N802",
     "N803",
@@ -4840,7 +4826,6 @@ convention = "google"
     "E402",
     "E501",
     "ERA001",
-    "EXE001",
     "F601",
     "N802",
     "N803",
@@ -4875,7 +4860,6 @@ convention = "google"
     "E402",
     "E501",
     "ERA001",
-    "EXE001",
     "F601",
     "N802",
     "N803",
@@ -5202,7 +5186,6 @@ convention = "google"
 ]
 "mxcubecore/HardwareObjects/abstract/AbstractXrayCentring.py" = [
     "EM101",
-    "EXE001",
     "N814",
     "N999",
     "TRY003",
@@ -5347,7 +5330,6 @@ convention = "google"
     "EM101",
     "EM102",
     "ERA001",
-    "EXE001",
     "N999",
     "S311",
     "TRY003",
@@ -5637,7 +5619,6 @@ convention = "google"
 "mxcubecore/HardwareObjects/mockup/MotorMockup.py" = [
     "E501",
     "ERA001",
-    "EXE001",
     "N999",
     "W293",
 ]
@@ -5801,7 +5782,6 @@ convention = "google"
     "N999",
 ]
 "mxcubecore/HardwareObjects/mockup/XrayCentringMockup.py" = [
-    "EXE001",
     "N999",
 ]
 "mxcubecore/HardwareObjects/sample_centring.py" = [
@@ -5953,7 +5933,6 @@ convention = "google"
     "C401",
     "C405",
     "C901",
-    "EXE001",
     "FBT002",
     "PLR0912",
     "PLR2044",
@@ -6168,7 +6147,6 @@ convention = "google"
     "BLE001",
     "C400",
     "E713",
-    "EXE001",
     "F821",
     "FBT002",
     "FLY002",
@@ -6208,15 +6186,13 @@ convention = "google"
     "N802",
 ]
 "test/TestAbstractActuatorBase.py" = [
-    "EXE001",
     "N999",
     "PT011",
     "PT012",
     "SLF001",
 ]
 "test/TestAbstractMotorBase.py" = [
     "B017",
-    "EXE001",
     "N999",
     "PT011",
     "PT012",
@@ -6225,13 +6201,11 @@ convention = "google"
 "test/TestAbstractNStateBase.py" = [
     "B017",
     "C400",
-    "EXE001",
     "N999",
     "PT011",
     "PT012",
 ]
 "test/TestHardwareObjectBase.py" = [
-    "EXE001",
     "N999",
     "PT022",
     "SLF001",
@@ -6282,7 +6256,6 @@ convention = "google"
     "ERA001",
 ]
 "test/test_beamline_ho_id.py" = [
-    "EXE001",
     "PT022",
     "SIM300",
 ]
@@ -6308,13 +6281,11 @@ convention = "google"
     "SLF001",
 ]
 "test/test_detector.py" = [
-    "EXE001",
     "F841",
     "PIE808",
     "PT022",
 ]
 "test/test_detector_distance.py" = [
-    "EXE001",
     "PT022",
 ]
 "test/test_energy.py" = [
@@ -6341,7 +6312,6 @@ convention = "google"
     "S106",
 ]
 "test/test_mach_info.py" = [
-    "EXE001",
     "PT022",
     "SLF001",
 ]
@@ -6355,7 +6325,6 @@ convention = "google"
     "SLF001",
 ]
 "test/test_sample_view.py" = [
-    "EXE001",
     "PT022",
 ]
 "test/test_shutter.py" = [
diff --git a/test/TestAbstractActuatorBase.py b/test/TestAbstractActuatorBase.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 # This file is part of MXCuBE.
diff --git a/test/TestAbstractMotorBase.py b/test/TestAbstractMotorBase.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 # This file is part of MXCuBE.
diff --git a/test/TestAbstractNStateBase.py b/test/TestAbstractNStateBase.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 # This file is part of MXCuBE.
diff --git a/test/TestHardwareObjectBase.py b/test/TestHardwareObjectBase.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 # This file is part of MXCuBE.
diff --git a/test/test_beamline_ho_id.py b/test/test_beamline_ho_id.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 # This file is part of MXCuBE.
diff --git a/test/test_detector.py b/test/test_detector.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 # This file is part of MXCuBE.
diff --git a/test/test_detector_distance.py b/test/test_detector_distance.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 # This file is part of MXCuBE.
diff --git a/test/test_mach_info.py b/test/test_mach_info.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 # This file is part of MXCuBE.
diff --git a/test/test_sample_view.py b/test/test_sample_view.py
@@ -1,4 +1,3 @@
-#! /usr/bin/env python
 # encoding: utf-8
 #
 # This file is part of MXCuBE.

Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,3 @@`
`1`		`-#! /usr/bin/env python`
`2`	`1`	`# encoding: utf-8`
`3`	`2`	`#`
`4`	`3`	`# Project: MXCuBE`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,3 @@`
`1`		`-# encoding: utf-8`
`2`	`1`	`"""Collection emulator, calling an external program to generate data images.`
`3`	`2`	`Written originally for Global Phasing simcal,`
`4`	`3`	`but could be made to work with other systems`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,3 @@`
`1`		`-# encoding: utf-8`
`2`	`1`	`"""Abstract beamline interface message classes`
`3`	`2`
`4`	`3`	`License:`
Original file line number	Diff line number	Diff line change
`@@ -1,5 +1,3 @@`
`1`		`-# encoding: utf-8`
`2`		`-`
`3`	`1`	`"""Workflow runner, interfacing to external workflow engine`
`4`	`2`	`using Abstract Beamline Interface messages`
`5`	`3`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,3 @@`
`1`		`-# encoding: utf-8`
`2`	`1`	`"""Workflow connection, interfacing to external workflow engine`
`3`	`2`	`using py4j and Abstract Beamline Interface messages`
`4`	`3`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,3 @@`
`1`		`-#!/usr/bin/env python3`
`2`	`1`	`# -- coding: utf-8 --`
`3`	`2`
`4`	`3`	`"""Transmission control for MANACA.`
Original file line number	Diff line number	Diff line change
`@@ -1,5 +1,3 @@`
`1`		`-#!/usr/bin/env python`
`2`		`-`
`3`	`1`	`#`
`4`	`2`	`# Generated Tue Oct 14 03:54::11 2014 by EDGenerateDS.`
`5`	`3`	`#`
Original file line number	Diff line number	Diff line change
`@@ -1,5 +1,3 @@`
`1`		`-#!/usr/bin/env python`
`2`		`-`
`3`	`1`	`#`
`4`	`2`	`# Generated Tue Jun 21 10:50::49 2011 by EDGenerateDS.`
`5`	`3`	`#`