[newchem-cpp] Cleanup initialization of `kcol_rate_tables`#413

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mabruzzo wants to merge 73 commits intograckle-project:newchem-cppfrom

mabruzzo:cleanup-kcol_rate_tables_init

Commits on Aug 28, 2025

Commits on Aug 29, 2025

Convert initialize_chemistry_data.c to C++
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convert initialize_rates.c to C++
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Move initialize_rates function into `grackle::impl` namespace
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convert initialize_metal_chemistry_rates.c to C++
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convert initialize_dust_yields.c to C++
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introduce internalu and delete local co_length_units & co_density_units
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eliminate uxyz and urho local variables (and start using internalu.a_units & internalu.a_value)
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Replace utim, dbase1, xbase1, tbase1 with internalu
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cleanup usage of dlogtem, temstart, and temend
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remove the temstart, temend, and nratec local variables (we now read the values directly from my_chemistry)
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remove the remaining forward declarations of local variables in grackle::impl::initialize_metal_chemistry_rates
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mv and reformat comment listing all collisional rxn rates
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make a few tweaks so we can make better use of InternalGrUnits within initialize_metal_chemistry_rates.cpp
mabruzzo
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Commits on Aug 30, 2025

Commits on Aug 31, 2025

Commits on Sep 2, 2025

Commits on Sep 6, 2025

Commits on Sep 8, 2025

Commits on Sep 11, 2025

Commits on Sep 12, 2025