v1.0.5

[1.0.5] - 2024-03-01

Changed

• Faster image writing for the Xenium Explorer (about x5 speedup)
• Cellpose default model set to "cyto3" (new cellpose version)
• Cell GeoDataFrame index consistent with obs_names

Added

• Support for python 3.9 to 3.11 (we still recommend python==3.10)
• Support WSI analysis: reader, tissue segmentation, patch embedding (tutorials coming soon)
• Supporting multiple region-of-interest queries
• Can load a custom cellpose model using the pretrained_model/model_type argument