Udating build/modulefiles for hafs_jedi(Jet)

Author: BijuThomas-NOAA

build.sh

@@ -71,7 +71,7 @@ while getopts "p:t:c:hvdfa" opt; do
 done
 
 case ${BUILD_TARGET} in
-  hera | orion | hercules | wcoss2 | noaacloud | gaea)
+  hera | orion | hercules | wcoss2 | noaacloud | gaea | jet)
     echo "Building GDASApp on $BUILD_TARGET"
     source $dir_root/ush/module-setup.sh
     module use $dir_root/modulefiles

modulefiles/GDAS/jet.intel.lua

@@ -0,0 +1,206 @@
+help([[
+Load environment for running the GDAS application with Intel compilers and MPI.
+]])
+
+local pkgName    = myModuleName()
+local pkgVersion = myModuleVersion()
+local pkgNameVer = myModuleFullName()
+
+prepend_path("MODULEPATH", '/mnt/lfs4/HFIP/hfv3gfs/role.epic/spack-stack/spack-stack-1.6.0/envs/unified-env-rocky8/install/modulefiles/Core')
+
+stack_intel_ver=os.getenv("stack_intel_ver") or "2021.5.0"
+load(pathJoin("stack-intel", stack_intel_ver))
+
+stack_impi_ver=os.getenv("stack_impi_ver") or "2021.5.1"
+load(pathJoin("stack-intel-oneapi-mpi", stack_impi_ver))
+
+cmake_ver=os.getenv("cmake_ver") or "3.23.1"
+load(pathJoin("cmake", cmake_ver))
+
+gettext_ver=os.getenv("gettext_ver") or "0.19.8.1"
+load(pathJoin("gettext", gettext_ver))
+
+pcre2_ver=os.getenv("pcre2_ver") or "10.42"
+load(pathJoin("pcre2", pcre2_ver))
+
+curl_ver=os.getenv("curl_ver") or "8.4.0"
+load(pathJoin("curl", curl_ver))
+
+zlib_ver=os.getenv("zlib_ver") or "1.2.13"
+load(pathJoin("zlib", zlib_ver))
+
+git_ver=os.getenv("git_ver") or "2.18.0"
+load(pathJoin("git", git_ver))
+
+pkg_config_ver=os.getenv("pkg_config_ver") or "0.27.1"
+load(pathJoin("pkg-config", pkg_config_ver))
+
+hdf5_ver=os.getenv("hdf5_ver") or "1.14.0"
+load(pathJoin("hdf5", hdf5_ver))
+
+pnetcdf_ver=os.getenv("pnetcdf_ver") or "1.12.2"                                                    
+load(pathJoin("parallel-netcdf", pnetcdf_ver))
+
+netcdf_c_ver=os.getenv("netcdf_c_ver") or "4.9.2"                                                    
+load(pathJoin("netcdf-c", netcdf_c_ver))
+
+nccmp_ver=os.getenv("nccmp_ver") or "1.9.0.1"
+load(pathJoin("nccmp", nccmp_ver))
+
+netcdf_fortran_ver=os.getenv("netcdf_fortran_ver") or "4.6.1"
+load(pathJoin("netcdf-fortran", netcdf_fortran_ver))
+
+nco_ver=os.getenv("nco_ver") or "5.0.6"
+load(pathJoin("nco", nco_ver))
+
+parallelio_ver=os.getenv("parallelio_ver") or "2.5.10"
+load(pathJoin("parallelio", parallelio_ver))
+
+wget_ver=os.getenv("wget_ver") or "1.14"
+load(pathJoin("wget", wget_ver))
+
+boost_ver=os.getenv("boost_ver") or "1.83.0"
+load(pathJoin("boost", boost_ver))
+
+bufr_ver=os.getenv("bufr_ver") or "12.0.1"
+load(pathJoin("bufr", bufr_ver))
+
+git_lfs_ver=os.getenv("git_lfs_ver") or "2.10.0"
+load(pathJoin("git-lfs", git_lfs_ver))
+
+ecbuild_ver=os.getenv("ecbuild_ver") or "3.7.2"
+load(pathJoin("ecbuild", ecbuild_ver))
+
+openjpeg_ver=os.getenv("openjpeg_ver") or "2.3.1"
+load(pathJoin("openjpeg", openjpeg_ver))
+
+eccodes_ver=os.getenv("eccodes_ver") or "2.32.0"
+load(pathJoin("eccodes", eccodes_ver))
+
+eigen_ver=os.getenv("eigen_ver") or "3.4.0"
+load(pathJoin("eigen", eigen_ver))
+
+openblas_ver=os.getenv("openblas_ver") or "0.3.24"
+load(pathJoin("openblas", openblas_ver))
+
+eckit_ver=os.getenv("eckit_ver") or "1.24.5"
+load(pathJoin("eckit", eckit_ver))
+
+fftw_ver=os.getenv("fftw_ver") or "3.3.10"
+load(pathJoin("fftw", fftw_ver))
+
+fckit_ver=os.getenv("fckit_ver") or "0.11.0" 
+load(pathJoin("fckit", fckit_ver))
+
+fiat_ver=os.getenv("fiat_ver") or "1.2.0" 
+load(pathJoin("fiat", fiat_ver))
+
+ectrans_ver=os.getenv("ectrans_ver") or "1.2.0" 
+--load(pathJoin("ectrans", ectrans_ver))
+
+fms_ver=os.getenv("fms_ver") or "2023.04"
+load(pathJoin("fms",fms_ver))
+
+atlas_ver=os.getenv("atlas_ver") or "0.35.1"
+load(pathJoin("atlas", atlas_ver))
+
+sp_ver=os.getenv("sp_ver") or "2.5.0"
+load(pathJoin("sp", sp_ver))
+
+gsl_lite_ver=os.getenv("gsl_lite_ver") or "0.37.0"
+load(pathJoin("gsl-lite", gsl_lite_ver))
+
+libjpeg_ver=os.getenv("libjpeg_ver") or "2.1.0"
+load(pathJoin("libjpeg", libjpeg_ver))
+
+krb5_ver=os.getenv("krb5_ver") or "1.20.1"
+load(pathJoin("krb5", krb5_ver))
+
+libtirpc_ver=os.getenv("libtirpc_ver") or "1.3.3"
+load(pathJoin("libtirpc", libtirpc_ver))
+
+hdf_ver=os.getenv("hdf_ver") or "4.2.15"
+load(pathJoin("hdf", hdf_ver))
+
+jedi_cmake_ver=os.getenv("jedi_cmake_ver") or "1.4.0"
+load(pathJoin("jedi-cmake", jedi_cmake_ver))
+
+libpng_ver=os.getenv("libpng_ver") or "1.6.37"
+load(pathJoin("libpng", libpng_ver))
+
+libxt_ver=os.getenv("libxt_ver") or "1.1.5"
+load(pathJoin("libxt", libxt_ver))
+
+libxmu_ver=os.getenv("libxmu_ver") or "1.1.4"
+load(pathJoin("libxmu", libxmu_ver))
+
+libxpm_ver=os.getenv("libxpm_ver") or "4.11.0"
+load(pathJoin("libxpm", libxpm_ver))
+
+libxaw_ver=os.getenv("libxaw_ver") or "1.0.13"
+load(pathJoin("libxaw", libxaw_ver))
+
+udunits_ver=os.getenv("udunits_ver") or "2.2.28"
+load(pathJoin("udunits", udunits_ver))
+
+ncview_ver=os.getenv("ncview_ver") or "2.1.9"
+load(pathJoin("ncview", ncview_ver))
+
+netcdf_cxx_ver=os.getenv("netcdf_cxx_ver") or "4.3.1"
+load(pathJoin("netcdf-cxx4", netcdf_cxx_ver))
+
+json_ver=os.getenv("json_ver") or "3.10.5"
+load(pathJoin("json", json_ver))
+
+rocoto_ver=os.getenv("rocoto_ver") or "1.3.6"
+load(pathJoin("rocoto", rocoto_ver))
+
+prod_util_ver=os.getenv("prod_util_ver") or "2.1.1"
+load(pathJoin("prod_util", prod_util_ver))
+
+pyjinja2_ver=os.getenv("pyjinja2_ver") or "3.0.3"
+load(pathJoin("py-jinja2", pyjinja2_ver))
+
+pynetcdf4_ver=os.getenv("pynetcdf4_ver") or "1.5.8"
+load(pathJoin("py-netcdf4", pynetcdf4_ver))
+
+pybind11_ver=os.getenv("pybind11_ver") or "2.11.0"
+load(pathJoin("py-pybind11", pybind11_ver))
+
+pycodestyle_ver=os.getenv("pycodestyle_ver") or "2.11.0"
+load(pathJoin("py-pycodestyle", pycodestyle_ver))
+
+pyyaml_ver=os.getenv("pyyaml_ver") or "6.0"
+load(pathJoin("py-pyyaml", pyyaml_ver))
+
+pyscipy_ver=os.getenv("pyscipy_ver") or "1.11.3"
+load(pathJoin("py-scipy", pyscipy_ver))
+
+pyxarray_ver=os.getenv("pyxarray_ver") or "2023.7.0"
+load(pathJoin("py-xarray", pyxarray_ver))
+
+pyf90nml_ver=os.getenv("pyf90nml_ver") or "1.4.3"
+--load(pathJoin("py-f90nml", pyf90nml_ver))
+
+pypip_ver=os.getenv("pypip_ver") or "23.1.2"
+--load(pathJoin("py-pip", pypip_ver))
+
+setenv("CC","mpiicc")
+setenv("FC","mpiifort")
+setenv("CXX","mpiicpc")
+local mpiexec = '/apps/slurm/default/bin/srun'
+local mpinproc = '-n'
+setenv('MPIEXEC_EXEC', mpiexec)
+setenv('MPIEXEC_NPROC', mpinproc)
+
+--setenv("CRTM_FIX","/lfs4/BMC/nrtrr/RDAS_DATA/crtm/2.4.0")
+--setenv("GDASAPP_TESTDATA","/lfs4/BMC/nrtrr/RDAS_DATA")
+--setenv("GDASAPP_UNIT_TEST_DATA_PATH", "/lfs4/BMC/nrtrr/RDAS_DATA")
+setenv("CRTM_FIX","/lfs5/HFIP/hwrf-data/GDASApp/fix/crtm/2.4.0")
+setenv("GDASAPP_TESTDATA","/lfs5/HFIP/hwrf-data/GDASApp/testdata")
+setenv("GDASAPP_UNIT_TEST_DATA_PATH", "/lfs5/HFIP/hwrf-data/GDASApp/unittestdata")
+
+whatis("Name: ".. pkgName)
+--whatis("Version: ".. pkgVersion)
+whatis("Category: GDASApp")
+whatis("Description: Load all libraries needed for GDASApp")