New dockerfile with Pytorch-3.2, solving conflict #103
Workflow file for this run
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| name: Build | |
| on: | |
| pull_request: | |
| types: [synchronize, labeled] | |
| jobs: | |
| build: | |
| name: Build and Test FastFold | |
| if: | | |
| github.event.pull_request.draft == false && | |
| github.base_ref == 'main' && | |
| github.event.pull_request.base.repo.full_name == 'hpcaitech/FastFold' && | |
| contains( github.event.pull_request.labels.*.name, 'Run Build and Test') | |
| runs-on: [self-hosted, gpu] | |
| container: | |
| image: hpcaitech/pytorch-cuda:1.12.0-11.3.0 | |
| options: --gpus all --rm -v /data/scratch/fastfold:/data/scratch/fastfold | |
| timeout-minutes: 40 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| repository: hpcaitech/FastFold | |
| ssh-key: ${{ secrets.SSH_KEY_FOR_CI }} | |
| - name: Install FastFold | |
| run: | | |
| [ ! -z "$(ls -A /github/home/fastfold_cache/)" ] && cp -r /github/home/fastfold_cache/* /__w/FastFold/FastFold/ | |
| pip install -r requirements/requirements.txt | |
| pip install -e . | |
| pip install -r requirements/test_requirements.txt | |
| cp -r /__w/FastFold/FastFold/build /github/home/fastfold_cache/ | |
| cp /__w/FastFold/FastFold/*.so /github/home/fastfold_cache/ | |
| - name: Unit Testing | |
| run: | | |
| PYTHONPATH=$PWD pytest tests | |
| env: | |
| NCCL_SHM_DISABLE: 1 | |