|
8 | 8 |
|
9 | 9 | <meta name="viewport" content="width=device-width, initial-scale=1.0">
|
10 | 10 |
|
11 |
| - <title>raredecay.analysis.ml_analysis — raredecay 1.1.0 documentation</title> |
| 11 | + <title>raredecay.analysis.ml_analysis — raredecay 1.2.0 documentation</title> |
12 | 12 |
|
13 | 13 |
|
14 | 14 |
|
|
33 | 33 | <link rel="index" title="Index"
|
34 | 34 | href="../../../genindex.html"/>
|
35 | 35 | <link rel="search" title="Search" href="../../../search.html"/>
|
36 |
| - <link rel="top" title="raredecay 1.1.0 documentation" href="../../../index.html"/> |
| 36 | + <link rel="top" title="raredecay 1.2.0 documentation" href="../../../index.html"/> |
37 | 37 | <link rel="up" title="Module code" href="../../index.html"/>
|
38 | 38 |
|
39 | 39 |
|
|
62 | 62 |
|
63 | 63 |
|
64 | 64 | <div class="version">
|
65 |
| - 1.1.0 |
| 65 | + 1.2.0 |
66 | 66 | </div>
|
67 | 67 |
|
68 | 68 |
|
@@ -562,7 +562,12 @@ <h1>Source code for raredecay.analysis.ml_analysis</h1><div class="highlight"><p
|
562 | 562 | <span class="n">max_auc</span> <span class="o">=</span> <span class="n">report</span><span class="o">.</span><span class="n">compute_metric</span><span class="p">(</span><span class="n">metrics</span><span class="o">.</span><span class="n">RocAuc</span><span class="p">())</span><span class="o">.</span><span class="n">values</span><span class="p">()[</span><span class="mi">0</span><span class="p">]</span>
|
563 | 563 | <span class="n">roc_auc</span> <span class="o">=</span> <span class="n">OrderedDict</span><span class="p">({</span><span class="s1">'all features'</span><span class="p">:</span> <span class="nb">round</span><span class="p">(</span><span class="n">max_auc</span><span class="p">,</span> <span class="mi">4</span><span class="p">)})</span>
|
564 | 564 | <span class="n">out</span><span class="o">.</span><span class="n">save_fig</span><span class="p">(</span><span class="n">figure</span><span class="o">=</span><span class="s2">"feature importance "</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">clf_name</span><span class="p">),</span> <span class="n">importance</span><span class="o">=</span><span class="mi">2</span><span class="p">,</span> <span class="o">**</span><span class="n">save_fig_cfg</span><span class="p">)</span>
|
565 |
| - <span class="n">report</span><span class="o">.</span><span class="n">feature_importance_shuffling</span><span class="p">()</span><span class="o">.</span><span class="n">plot</span><span class="p">()</span> |
| 565 | + <span class="c1"># HACK: temp_plotter1 is used to set the plot.new_plot to False,</span> |
| 566 | + <span class="c1"># which is set to True (unfortunately) in the init of GridPlot</span> |
| 567 | + <span class="n">temp_plotter1</span> <span class="o">=</span> <span class="n">report</span><span class="o">.</span><span class="n">feature_importance_shuffling</span><span class="p">()</span> |
| 568 | + <span class="n">temp_plotter1</span><span class="o">.</span><span class="n">new_plot</span> <span class="o">=</span> <span class="kc">False</span> |
| 569 | + <span class="n">temp_plotter1</span><span class="o">.</span><span class="n">plot</span><span class="p">(</span><span class="n">title</span><span class="o">=</span><span class="s2">"Feature importance shuffling of "</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">clf_name</span><span class="p">))</span> |
| 570 | + <span class="c1"># HACK END</span> |
566 | 571 | <span class="n">out</span><span class="o">.</span><span class="n">save_fig</span><span class="p">(</span><span class="n">figure</span><span class="o">=</span><span class="s2">"feature correlation "</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">clf_name</span><span class="p">),</span> <span class="n">importance</span><span class="o">=</span><span class="mi">2</span><span class="p">,</span> <span class="o">**</span><span class="n">save_fig_cfg</span><span class="p">)</span>
|
567 | 572 | <span class="n">report</span><span class="o">.</span><span class="n">features_correlation_matrix</span><span class="p">()</span><span class="o">.</span><span class="n">plot</span><span class="p">()</span>
|
568 | 573 | <span class="n">out</span><span class="o">.</span><span class="n">save_fig</span><span class="p">(</span><span class="n">figure</span><span class="o">=</span><span class="s2">"ROC curve "</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">clf_name</span><span class="p">),</span> <span class="n">importance</span><span class="o">=</span><span class="mi">2</span><span class="p">,</span> <span class="o">**</span><span class="n">save_fig_cfg</span><span class="p">)</span>
|
@@ -1604,7 +1609,7 @@ <h1>Source code for raredecay.analysis.ml_analysis</h1><div class="highlight"><p
|
1604 | 1609 | <script type="text/javascript">
|
1605 | 1610 | var DOCUMENTATION_OPTIONS = {
|
1606 | 1611 | URL_ROOT:'../../../',
|
1607 |
| - VERSION:'1.1.0', |
| 1612 | + VERSION:'1.2.0', |
1608 | 1613 | COLLAPSE_INDEX:false,
|
1609 | 1614 | FILE_SUFFIX:'.html',
|
1610 | 1615 | HAS_SOURCE: true
|
|
0 commit comments