From e62a43bd15de11a746f896f84c1024de6c14d903 Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Tue, 2 Sep 2025 11:42:40 +0000 Subject: [PATCH] Bump the pip group in /src with 11 updates Bumps the pip group in /src with 11 updates: | Package | From | To | | --- | --- | --- | | [beautifulsoup4](https://www.crummy.com/software/BeautifulSoup/bs4/) | `4.13.4` | `4.13.5` | | [certifi](https://github.com/certifi/python-certifi) | `2025.7.14` | `2025.8.3` | | [cryptography](https://github.com/pyca/cryptography) | `45.0.5` | `45.0.7` | | [jsonschema](https://github.com/python-jsonschema/jsonschema) | `4.25.0` | `4.25.1` | | [plotly](https://github.com/plotly/plotly.py) | `6.2.0` | `6.3.0` | | [pandas](https://github.com/pandas-dev/pandas) | `2.3.1` | `2.3.2` | | [pymongo](https://github.com/mongodb/mongo-python-driver) | `4.13.2` | `4.14.1` | | [requests](https://github.com/psf/requests) | `2.32.4` | `2.32.5` | | [tornado](https://github.com/tornadoweb/tornado) | `6.5.1` | `6.5.2` | | [coverage](https://github.com/nedbat/coveragepy) | `7.10.1` | `7.10.6` | | [ruff](https://github.com/astral-sh/ruff) | `0.12.7` | `0.12.11` | Updates `beautifulsoup4` from 4.13.4 to 4.13.5 Updates `certifi` from 2025.7.14 to 2025.8.3 - [Commits](https://github.com/certifi/python-certifi/compare/2025.07.14...2025.08.03) Updates `cryptography` from 45.0.5 to 45.0.7 - [Changelog](https://github.com/pyca/cryptography/blob/main/CHANGELOG.rst) - [Commits](https://github.com/pyca/cryptography/compare/45.0.5...45.0.7) Updates `jsonschema` from 4.25.0 to 4.25.1 - [Release notes](https://github.com/python-jsonschema/jsonschema/releases) - [Changelog](https://github.com/python-jsonschema/jsonschema/blob/main/CHANGELOG.rst) - [Commits](https://github.com/python-jsonschema/jsonschema/compare/v4.25.0...v4.25.1) Updates `plotly` from 6.2.0 to 6.3.0 - [Release notes](https://github.com/plotly/plotly.py/releases) - [Changelog](https://github.com/plotly/plotly.py/blob/main/CHANGELOG.md) - [Commits](https://github.com/plotly/plotly.py/compare/v6.2.0...v6.3.0) Updates `pandas` from 2.3.1 to 2.3.2 - [Release notes](https://github.com/pandas-dev/pandas/releases) - [Commits](https://github.com/pandas-dev/pandas/compare/v2.3.1...v2.3.2) Updates `pymongo` from 4.13.2 to 4.14.1 - [Release notes](https://github.com/mongodb/mongo-python-driver/releases) - [Changelog](https://github.com/mongodb/mongo-python-driver/blob/master/doc/changelog.rst) - [Commits](https://github.com/mongodb/mongo-python-driver/compare/4.13.2...4.14.1) Updates `requests` from 2.32.4 to 2.32.5 - [Release notes](https://github.com/psf/requests/releases) - [Changelog](https://github.com/psf/requests/blob/main/HISTORY.md) - [Commits](https://github.com/psf/requests/compare/v2.32.4...v2.32.5) Updates `tornado` from 6.5.1 to 6.5.2 - [Changelog](https://github.com/tornadoweb/tornado/blob/master/docs/releases.rst) - [Commits](https://github.com/tornadoweb/tornado/compare/v6.5.1...v6.5.2) Updates `coverage` from 7.10.1 to 7.10.6 - [Release notes](https://github.com/nedbat/coveragepy/releases) - [Changelog](https://github.com/nedbat/coveragepy/blob/master/CHANGES.rst) - [Commits](https://github.com/nedbat/coveragepy/compare/7.10.1...7.10.6) Updates `ruff` from 0.12.7 to 0.12.11 - [Release notes](https://github.com/astral-sh/ruff/releases) - [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md) - [Commits](https://github.com/astral-sh/ruff/compare/0.12.7...0.12.11) --- updated-dependencies: - dependency-name: beautifulsoup4 dependency-version: 4.13.5 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: pip - dependency-name: certifi dependency-version: 2025.8.3 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: pip - dependency-name: cryptography dependency-version: 45.0.7 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: pip - dependency-name: jsonschema dependency-version: 4.25.1 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: pip - dependency-name: plotly dependency-version: 6.3.0 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: pip - dependency-name: pandas dependency-version: 2.3.2 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: pip - dependency-name: pymongo dependency-version: 4.14.1 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: pip - dependency-name: requests dependency-version: 2.32.5 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: pip - dependency-name: tornado dependency-version: 6.5.2 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: pip - dependency-name: coverage dependency-version: 7.10.6 dependency-type: direct:development update-type: version-update:semver-patch dependency-group: pip - dependency-name: ruff dependency-version: 0.12.11 dependency-type: direct:development update-type: version-update:semver-patch dependency-group: pip ... Signed-off-by: dependabot[bot] --- src/requirements-dev.txt | 4 ++-- src/requirements.txt | 18 +++++++++--------- 2 files changed, 11 insertions(+), 11 deletions(-) diff --git a/src/requirements-dev.txt b/src/requirements-dev.txt index 1a9986c3f0..eff6bcb019 100644 --- a/src/requirements-dev.txt +++ b/src/requirements-dev.txt @@ -1,7 +1,7 @@ -coverage==7.10.1 +coverage==7.10.6 pytest==8.4.1 pytest-cov==6.2.1 pytest-recording==0.13.4 requests-mock==1.12.1 -ruff==0.12.7 +ruff==0.12.11 vcrpy==7.0.0 diff --git a/src/requirements.txt b/src/requirements.txt index 7fc7d9ddad..6a7ba02ec7 100644 --- a/src/requirements.txt +++ b/src/requirements.txt @@ -1,16 +1,16 @@ appdirs==1.4.4 -beautifulsoup4==4.13.4 +beautifulsoup4==4.13.5 biopython==1.85 bokeh==3.6.2 -certifi==2025.7.14 +certifi==2025.8.3 chardet==5.2.0 chart_studio==1.1.0 -cryptography==45.0.5 +cryptography==45.0.7 decorator==5.2.1 ete3==3.1.3 html5lib==1.1 idna==3.10 -jsonschema==4.25.0 +jsonschema==4.25.1 markdown==3.8.2 markupsafe==3.0.2 ndg-httpsclient==0.5.1 @@ -19,7 +19,7 @@ numpy==2.2.3 pexpect==4.9.0 pickleshare==0.7.5 pillow==11.3.0 -plotly==6.2.0 +plotly==6.3.0 pyasn1==0.6.1 pycurl==7.45.6 pygments==2.19.2 @@ -43,10 +43,10 @@ ipywidgets==8.1.7 jinja2==3.1.6 # N.b. notebook version must stay under 7 notebook==6.5.7 -pandas==2.3.1 -pymongo==4.13.2 +pandas==2.3.2 +pymongo==4.14.1 pyyaml==6.0.2 -requests==2.32.4 +requests==2.32.5 scikit-learn==1.6.1 statsmodels==0.14.5 -tornado==6.5.1 +tornado==6.5.2