Šikić lab
A computational group with a focus on the development of new algorithms and AI models for the analysis of DNA and RNA sequencing data and biomolecular strucures
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graphmap2
graphmap2 PublicForked from isovic/graphmap
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/ncomms11307.html https://www.biorxiv.org/content/10.1101/7204…
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Showing 10 of 26 repositories
- herro Public
HERRO is a highly-accurate, haplotype-aware, deep-learning tool for error correction of Nanopore R10.4.1 or R9.4.1 reads (read length of >= 10 kbps is recommended).
lbcb-sci/herro’s past year of commit activity - MADRe Public
Strain-level metagenomic classification with Metagenome Assembly driven Database Reduction approach
lbcb-sci/MADRe’s past year of commit activity - metaxa Public
lbcb-sci/metaxa’s past year of commit activity - GNNome Public
A framework for training graph neural networks to untangle assembly graphs obtained from OLC-based de novo genome assemblers.
lbcb-sci/GNNome’s past year of commit activity - rockfish Public
lbcb-sci/rockfish’s past year of commit activity
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