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Test with bioc-devel using CRAN = "https://packagemanager.posit.co/cr… #249

Test with bioc-devel using CRAN = "https://packagemanager.posit.co/cr…

Test with bioc-devel using CRAN = "https://packagemanager.posit.co/cr… #249

Triggered via push March 19, 2025 02:01
Status Failure
Total duration 9m 48s
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check-bioc.yml

on: push
bioc-config
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bioc-config
Matrix: build-check
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6 errors and 30 warnings
macOS-latest (devel)
--- re-building ‘biocthis_dev_notes.Rmd’ using rmarkdown
macOS-latest (devel)
processing vignette 'biocthis_dev_notes.Rmd' failed with diagnostics:
macOS-latest (devel)
processing vignette 'biocthis.Rmd' failed with diagnostics:
macOS-latest (devel)
Vignette re-building failed.
macOS-latest (devel)
Failed to install 'biocthis' from local:
macOS-latest (devel)
Process completed with exit code 1.
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/windows/contrib/4.6:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/annotation/bin/windows/contrib/4.6:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/windows/contrib/4.6:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.6:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/windows/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/annotation/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/annotation/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/annotation/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/annotation/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.6:
macOS-latest (devel)
No files were found with the provided path: check. No artifacts will be uploaded.
macOS-latest (devel)
pkgconf 2.4.3 is already installed and up-to-date. To reinstall 2.4.3, run: brew reinstall pkgconf
macOS-latest (devel)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
macOS-latest (devel)
harfbuzz 10.4.0_1 is already installed and up-to-date. To reinstall 10.4.0_1, run: brew reinstall harfbuzz
macOS-latest (devel)
fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi