R-CMD-check-bioc

Test with bioc-devel using CRAN = "https://packagemanager.posit.co/cr… #249

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6 errors and 25 warnings

--- re-building ‘biocthis_dev_notes.Rmd’ using rmarkdown

processing vignette 'biocthis_dev_notes.Rmd' failed with diagnostics:

processing vignette 'biocthis.Rmd' failed with diagnostics:

Vignette re-building failed.

Failed to install 'biocthis' from local:

Process completed with exit code 1.

unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/data/annotation/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/data/annotation/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/data/annotation/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/data/annotation/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.6:

unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.6:

No files were found with the provided path: check. No artifacts will be uploaded.

pkgconf 2.4.3 is already installed and up-to-date. To reinstall 2.4.3, run: brew reinstall pkgconf

HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!

harfbuzz 10.4.0_1 is already installed and up-to-date. To reinstall 10.4.0_1, run: brew reinstall harfbuzz

fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi

The logs for this run have expired and are no longer available.