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Test with bioc-devel
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.github/workflows/check-bioc.yml

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@@ -40,7 +40,7 @@ env:
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has_RUnit: 'false'
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cache-version: 'cache-v1'
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run_docker: 'false'
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use_latest_bioc_release: 'true' ## Otherwise bioc-devel will be used.
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use_latest_bioc_release: 'false' ## Otherwise bioc-devel will be used.
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jobs:
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bioc-config:
@@ -61,7 +61,7 @@ jobs:
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biocminor=$(echo "$biocversion" | cut -c 3-4)
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bioccont=$(echo "bioconductor/bioconductor_docker:RELEASE_${biocmajor}_${biocminor}")
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else
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## In this case we assume that you want to use the devel version
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## In this case we assume that you want to use the bioc-devel version
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echo "Finding the latest BioC devel version and the corresponding R version"
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biocversion=$(echo "$bioc" | grep "devel_version: " | grep -Eo "[0-9]{1}\.[0-9]{2}")
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rversion=$(echo "$bioc" | grep "r_version_associated_with_devel: " | grep -Eo "[0-9]{1}\.[0-9]{1}")

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