add CaCO3_prod to output, add cocco_C_lim to output

Author: Kristen Krumhardt

autogenerated_src/default_diagnostics.json

@@ -1,4 +1,24 @@
 {
+   "((autotroph_sname))_C_lim_Cweight_avg_100m": {
+      "dependencies": {
+         "((autotroph_calcifier))": true
+      },
+      "frequency": "medium",
+      "longname": "((autotroph_lname)) C Limitation, carbon biomass weighted average over 0-100m",
+      "operator": "average",
+      "units": 1,
+      "vertical_grid": "none"
+   },
+   "((autotroph_sname))_C_lim_surf": {
+      "dependencies": {
+         "((autotroph_calcifier))": true
+      },
+      "frequency": "medium",
+      "longname": "((autotroph_lname)) C Limitation, Surface",
+      "operator": "average",
+      "units": 1,
+      "vertical_grid": "none"
+   },
    "((autotroph_sname))_CaCO3_form": {
       "dependencies": {
          "((autotroph_calcifier))": true
@@ -1004,7 +1024,7 @@
       "vertical_grid": "layer_avg"
    },
    "CaCO3_PROD": {
-      "frequency": "low",
+      "frequency": "medium",
       "longname": "CaCO3 Production",
       "operator": "average",
       "units": "mmol/m^3/s",

src/default_diagnostics.yaml

@@ -912,7 +912,7 @@ CaCO3_PROD :
    longname : CaCO3 Production
    units : mmol/m^3/s
    vertical_grid : layer_avg
-   frequency : low
+   frequency : medium
    operator : average
 CaCO3_REMIN :
    longname : CaCO3 Remineralization
@@ -1302,6 +1302,22 @@ CISO_eps_dic_g :
 # Per-autotroph Diagnostics #
 #############################
 
+((autotroph_sname))_C_lim_surf :
+   dependencies :
+      ((autotroph_calcifier)) : true
+   longname : ((autotroph_lname)) C Limitation, Surface
+   units : 1
+   vertical_grid : none
+   frequency : medium
+   operator : average
+((autotroph_sname))_C_lim_Cweight_avg_100m :
+   dependencies :
+      ((autotroph_calcifier)) : true
+   longname : ((autotroph_lname)) C Limitation, carbon biomass weighted average over 0-100m
+   units : 1
+   vertical_grid : none
+   frequency : medium
+   operator : average
 ((autotroph_sname))_N_lim_surf :
    longname : ((autotroph_lname)) N Limitation, Surface
    units : 1