fixed bug when exporting all images. this refs #230

Author: JeanBilheux

notebooks/__code/normalization_tof/normalization_for_timepix.py

@@ -409,7 +409,8 @@ def export_ob_images(ob_run_numbers,
                      spectra_file_name):
     """export ob images to the output folder"""
     logging.info(f"> Exporting combined ob images to {output_folder} ...")
-    list_ob_runs_number_only = [isolate_run_number(_ob_run_number) for _ob_run_number in ob_run_numbers]
+    logging.info(f"\t{ob_run_numbers = }")
+    list_ob_runs_number_only = [str(isolate_run_number_from_full_path(_ob_run_number)) for _ob_run_number in ob_run_numbers]
     if len(list_ob_runs_number_only) == 1:
         ob_output_folder = os.path.join(output_folder, f"ob_{list_ob_runs_number_only[0]}")
     else:
@@ -455,6 +456,12 @@ def make_tiff(data: list, filename: str = "", metadata: dict = None) -> None:
         new_image.save(filename)
 
 
+def isolate_run_number_from_full_path(run_number_full_path: str) -> str:
+    """isolate the run number from the full path"""
+    run_number = os.path.basename(run_number_full_path)
+    return isolate_run_number(run_number)
+
+
 def isolate_run_number(run_number_full_path: str) -> int:
     run_number = os.path.basename(run_number_full_path)
     run_number = run_number.split("_")[1]

notebooks/__code/normalization_tof/normalization_tof.py

@@ -95,7 +95,7 @@ def manually_set_runs(self):
         self.sample_run_numbers_widget = widgets.Textarea(value=str_sample_run_numbers,
                                                     placeholder="",
                                                     layout=widgets.Layout(width='400px'))
-        ob_label = widgets.Label(value="List of ob run numbers (ex: 8703)")
+        ob_label = widgets.Label(value="List of ob run numbers (ex: 8703, 8705)")
         self.ob_run_numbers_widget = widgets.Textarea(value=str_ob_run_numbers,
                                                 placeholder="",
                                                 layout=widgets.Layout(width='400px'))