Search results

funannotate misses the execute bit on scripts in <code>aux_scripts</code>

Status: Open.

#1129 In nextgenusfs/funannotate;

· bernt-matthias opened on Oct 6, 2025

Tips for visualisation

Status: Open.

#1127 In nextgenusfs/funannotate;

· pwkooij opened on Sep 26, 2025

error when running funannotate predict

Status: Open.

#1126 In nextgenusfs/funannotate;

· xiaorongsmile opened on Sep 22, 2025

[QUESTION] annotate_results files are missing some information contained in "annotate_misc/all.annotations.txt"

Status: Open.

#1125 In nextgenusfs/funannotate;

· DaRinker opened on Sep 19, 2025

funannotate test fails at signalp step

Status: Open.

#1120 In nextgenusfs/funannotate;

· vkkodali opened on Jul 28, 2025

Suggestion: option to specify evidence type to '--other_gff'

Status: Open.

#1119 In nextgenusfs/funannotate;

· jamesord opened on Jul 17, 2025

what data and files are needed for train step

Status: Open.

#1118 In nextgenusfs/funannotate;

· ds-gene104 opened on Jul 15, 2025

CMD ERROR: stringtie

Status: Open.

#1117 In nextgenusfs/funannotate;

· shanmugavadivelps opened on Jul 9, 2025

tmp files after predict run

Status: Open.

#1112 In nextgenusfs/funannotate;

· keroguynes opened on Jun 25, 2025

Can funanotate use strand-specific RNA-seq data to annotate overlapped gene?

Status: Open.

#1111 In nextgenusfs/funannotate;

· sysu-cxz opened on May 30, 2025

SignalP results not ending up in final annotation

Status: Open.

#1110 In nextgenusfs/funannotate;

· JWDebler opened on May 24, 2025

funannotate annotate fails at the BUSCO annotation step

Status: Open.

#1108 In nextgenusfs/funannotate;

· SM-2797 opened on May 20, 2025