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Description
When i am running funannotate predict, command line as follow:
funannotate predict -i masked_cleaned_assembly.fasta -o funannotate_out -s "Aspergillus oryzae" --cpus 16
Then there is some error in the busco.log file:
Exception in thread hmmer-aspergillus_oryzae-10:
Traceback (most recent call last):
File "/home/xiaorong2/miniconda3/envs/funannotate/lib/python3.8/threading.py", line 932, in _bootstrap_inner
self.run()
File "/home/xiaorong2/miniconda3/envs/funannotate/lib/python3.8/site-packages/funannotate/aux_scripts/funannotate-BUSCO2.py", line 235, in run
self.analysis._process_hmmer_tasks()
File "/home/xiaorong2/miniconda3/envs/funannotate/lib/python3.8/site-packages/funannotate/aux_scripts/funannotate-BUSCO2.py", line 2049, in _process_hmmer_tasks
if state > self.slate[-1]:
IndexError: list index out of range
And size of my genome is about 37M, this command has been running for two hours and still hasn't finished.
What's the problem.