Issue459 oasis ocean coupling #46
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| name: compile code and tests | |
| on: | |
| push: | |
| branches: [ main, develop ] | |
| pull_request: | |
| branches: [ main, develop ] | |
| jobs: | |
| test-ubuntu-serial: | |
| runs-on: ubuntu-22.04 | |
| container: | |
| image: ghcr.io/nextsimhub/nextsimdg-dev-env:latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: build and compile without XIOS or MPI | |
| run: | | |
| . /opt/spack-environment/activate.sh | |
| mkdir -p build && cd build | |
| cmake .. | |
| make -j 4 | |
| - name: run serial tests | |
| run: | | |
| . /opt/spack-environment/activate.sh | |
| apt update | |
| apt install -y wget | |
| cd build | |
| (cd core/test && wget "ftp://ftp.nersc.no/nextsim/netCDF/partition_metadata_1.nc") | |
| for component in core physics dynamics | |
| do | |
| cd $component/test | |
| for file in $(find test* -maxdepth 0 -type f) | |
| do | |
| echo $file | |
| ./$file | |
| done | |
| cd - | |
| done | |
| mv ../test . | |
| cd test | |
| python3 ThermoIntegration_test.py | |
| cd - | |
| test-ubuntu-mpi: | |
| runs-on: ubuntu-22.04 | |
| container: | |
| image: ghcr.io/nextsimhub/nextsimdg-dev-env:latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: build and compile with XIOS and MPI | |
| run: | | |
| . /opt/spack-environment/activate.sh | |
| mkdir -p build && cd build | |
| cmake -DENABLE_MPI=ON -Dxios_DIR="/xios" -DENABLE_XIOS=ON -DCMAKE_CXX_COMPILER="$(which mpic++)" .. | |
| make -j 4 | |
| - name: run MPI tests | |
| run: | | |
| . /opt/spack-environment/activate.sh | |
| apt update | |
| apt install -y wget | |
| cd build | |
| (cd core/test && wget "ftp://ftp.nersc.no/nextsim/netCDF/partition_metadata_1.nc") | |
| for component in core physics dynamics | |
| do | |
| cd $component/test | |
| for file in $(find test* -maxdepth 0 -type f) | |
| do | |
| echo $file | |
| nprocs=$(echo $file | sed -r "s/.*MPI([0-9]+)/\1/") | |
| mpirun --allow-run-as-root --oversubscribe -n $nprocs ./$file | |
| done | |
| cd - | |
| done | |
| cd - | |
| test-mac-serial: | |
| runs-on: macos-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: installs | |
| run: | | |
| brew install netcdf | |
| brew install netcdf-cxx | |
| brew install boost | |
| brew install eigen | |
| brew install cmake | |
| pip install numpy | |
| pip install netCDF4 | |
| # tmate can be used to get an interactive ssh session to the github runner | |
| # for debugging actions. See | |
| # [here](https://github.com/mxschmitt/action-tmate) for more information. | |
| # uncomment these lines to debug mac build | |
| # - name: Setup tmate session | |
| # uses: mxschmitt/action-tmate@v3 | |
| - name: make | |
| run: | | |
| mkdir -p build | |
| cd build | |
| # added Python_ROOT_DIR to help cmake find correct Python in the mac VM | |
| cmake -DENABLE_MPI=OFF -DENABLE_XIOS=OFF -DPython_ROOT_DIR=/Library/Frameworks/Python.framework/Versions/Current/bin .. | |
| make -j 4 | |
| - name: run serial tests | |
| run: | | |
| cd build | |
| for component in core physics dynamics | |
| do | |
| cd $component/test | |
| for file in $(find test* -maxdepth 0 -type f | grep -v "_MPI\d*$") | |
| do | |
| echo $file | |
| ./$file | |
| done | |
| cd - | |
| done | |
| mv ../test . | |
| cd test | |
| python ThermoIntegration_test.py | |
| cd - |