Search results

Add somalier to identify sample swaps

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#340 In nf-core/demultiplex;

· grst opened on Jul 31, 2025

Pipeline run

bugSomething isn't workingSomething isn't working

Status: Open.

#339 In nf-core/demultiplex;

· Mau-sumi-lab opened on Jul 26, 2025

fqtk doesn't work on AWS batch

bugSomething isn't workingSomething isn't working

Status: Open.

#338 In nf-core/demultiplex;

· SPPearce opened on Jul 18, 2025

· 

1.7.0

Considering bumping CheckQC

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#324 In nf-core/demultiplex;

· lbeltrame opened on Apr 22, 2025

· 

1.7.0

Detected samplesheet adapters being passed through the pipeline to fastp for trimming

Status: Open.

Enhancement

#318 In nf-core/demultiplex;

· edmundmiller opened on Mar 11, 2025

<code>“--detect_adapter_for_pe”</code> is hardcoded in fastp module

Status: Open.

Bug

#317 In nf-core/demultiplex;

· edmundmiller opened on Mar 11, 2025

Port tests to nft-utils

Status: Open.

Enhancement

#313 In nf-core/demultiplex;

· edmundmiller opened on Feb 18, 2025

· 

1.7.0

With Illumina instruments, copy RunInfo.xml along InterOp to the output directory even when CheckQC is disabled

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#309 In nf-core/demultiplex;

· lbeltrame opened on Feb 5, 2025

· 

1.7.0

Singularity Illegal instructions

Status: Open.

#303 In nf-core/demultiplex;

· edmundmiller opened on Dec 13, 2024

MultiQC not resuming

Status: Open.

#233 In nf-core/demultiplex;

· apeltzer opened on Aug 8, 2024

· 

1.7.0

Add demultipexing for MGI sequencing machines

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#184 In nf-core/demultiplex;

· ziadbkh opened on May 2, 2024

Update the citation tools

Status: Open.

#146 In nf-core/demultiplex;

· edmundmiller opened on Oct 17, 2023

· 

1.7.0