From 45060e03aaded5e8b24c4d649e1a8882b6c82b31 Mon Sep 17 00:00:00 2001
From: Usman Rashid <usman@smme.edu.pk>
Date: Sat, 24 May 2025 21:01:09 +1200
Subject: [PATCH] Bumped PARABRICKS_FQ2BAMMETH memory to 100.GB

---
 CHANGELOG.md     | 1 +
 conf/base.config | 3 +++
 2 files changed, 4 insertions(+)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index 904e348f1..4e9018f84 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -9,6 +9,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 - 🐛 fix when fasta idx is not provided and bwameth is on. The error is: `Not a valid path value type: java.util.LinkedHashMap ([:])`. To replicate this you can comment the `fasta_index` in the test data.
 - 🔄 Updated template to nf-core/tools v3.2.0 [#](https://github.com/nf-core/methylseq/pull/)
+- 🐛 bumped the minimum for `PARABRICKS_FQ2BAMMETH` to 100.GB as suggested by the docs [#528](https://github.com/nf-core/methylseq/issues/528)
 
 ### Pipeline Updates
 
diff --git a/conf/base.config b/conf/base.config
index b36325041..6d2d8493e 100644
--- a/conf/base.config
+++ b/conf/base.config
@@ -74,4 +74,7 @@ process {
     withName: BWAMETH_ALIGN {
         time = { 6.d * task.attempt }
     }
+    withName: PARABRICKS_FQ2BAMMETH {
+        memory = { 100.GB * task.attempt }
+    }
 }