Merge pull request #1657 from elena-buscaroli/modules

Adding new mobster, viber, ctree and bascule modules test datasets

Author: elena-buscaroli

data/delete_me/bascule/counts_matrices/HCC1395_WXS.DBS78.all

@@ -0,0 +1,79 @@
+MutationType	HCC1395_HCC1395T
+AC>CA	0
+AC>CG	0
+AC>CT	0
+AC>GA	0
+AC>GG	0
+AC>GT	0
+AC>TA	0
+AC>TG	0
+AC>TT	0
+AT>CA	0
+AT>CC	0
+AT>CG	0
+AT>GA	0
+AT>GC	0
+AT>TA	0
+CC>AA	1
+CC>AG	0
+CC>AT	1
+CC>GA	0
+CC>GG	0
+CC>GT	0
+CC>TA	1
+CC>TG	0
+CC>TT	9
+CG>AT	0
+CG>GC	0
+CG>GT	0
+CG>TA	0
+CG>TC	0
+CG>TT	0
+CT>AA	1
+CT>AC	0
+CT>AG	0
+CT>GA	1
+CT>GC	0
+CT>GG	0
+CT>TA	1
+CT>TC	3
+CT>TG	0
+GC>AA	1
+GC>AG	0
+GC>AT	1
+GC>CA	0
+GC>CG	0
+GC>TA	0
+TA>AT	0
+TA>CG	0
+TA>CT	0
+TA>GC	0
+TA>GG	0
+TA>GT	0
+TC>AA	0
+TC>AG	1
+TC>AT	1
+TC>CA	0
+TC>CG	0
+TC>CT	0
+TC>GA	1
+TC>GG	0
+TC>GT	1
+TG>AA	0
+TG>AC	0
+TG>AT	0
+TG>CA	1
+TG>CC	0
+TG>CT	0
+TG>GA	0
+TG>GC	0
+TG>GT	1
+TT>AA	1
+TT>AC	0
+TT>AG	0
+TT>CA	0
+TT>CC	0
+TT>CG	0
+TT>GA	0
+TT>GC	0
+TT>GG	0

data/delete_me/bascule/counts_matrices/HCC1395_WXS.ID83.all

@@ -0,0 +1,84 @@
+MutationType	HCC1395_HCC1395T
+1:Del:C:0	7
+1:Del:C:1	4
+1:Del:C:2	0
+1:Del:C:3	0
+1:Del:C:4	1
+1:Del:C:5	0
+1:Del:T:0	3
+1:Del:T:1	1
+1:Del:T:2	2
+1:Del:T:3	0
+1:Del:T:4	1
+1:Del:T:5	4
+1:Ins:C:0	2
+1:Ins:C:1	1
+1:Ins:C:2	1
+1:Ins:C:3	0
+1:Ins:C:4	0
+1:Ins:C:5	1
+1:Ins:T:0	2
+1:Ins:T:1	1
+1:Ins:T:2	0
+1:Ins:T:3	0
+1:Ins:T:4	0
+1:Ins:T:5	9
+2:Del:R:0	2
+2:Del:R:1	0
+2:Del:R:2	1
+2:Del:R:3	0
+2:Del:R:4	0
+2:Del:R:5	0
+3:Del:R:0	1
+3:Del:R:1	0
+3:Del:R:2	0
+3:Del:R:3	1
+3:Del:R:4	0
+3:Del:R:5	0
+4:Del:R:0	1
+4:Del:R:1	0
+4:Del:R:2	0
+4:Del:R:3	0
+4:Del:R:4	0
+4:Del:R:5	0
+5:Del:R:0	16
+5:Del:R:1	2
+5:Del:R:2	1
+5:Del:R:3	0
+5:Del:R:4	0
+5:Del:R:5	0
+2:Ins:R:0	1
+2:Ins:R:1	0
+2:Ins:R:2	0
+2:Ins:R:3	0
+2:Ins:R:4	0
+2:Ins:R:5	0
+3:Ins:R:0	2
+3:Ins:R:1	0
+3:Ins:R:2	0
+3:Ins:R:3	0
+3:Ins:R:4	0
+3:Ins:R:5	1
+4:Ins:R:0	0
+4:Ins:R:1	2
+4:Ins:R:2	0
+4:Ins:R:3	0
+4:Ins:R:4	0
+4:Ins:R:5	0
+5:Ins:R:0	2
+5:Ins:R:1	1
+5:Ins:R:2	0
+5:Ins:R:3	0
+5:Ins:R:4	0
+5:Ins:R:5	0
+2:Del:M:1	2
+3:Del:M:1	0
+3:Del:M:2	0
+4:Del:M:1	0
+4:Del:M:2	0
+4:Del:M:3	0
+5:Del:M:1	11
+5:Del:M:2	12
+5:Del:M:3	10
+5:Del:M:4	9
+5:Del:M:5	7

data/delete_me/bascule/counts_matrices/HCC1395_WXS.SBS96.all

@@ -0,0 +1,97 @@
+MutationType	HCC1395_HCC1395T
+A[C>A]A	19
+A[C>A]C	13
+A[C>A]G	3
+A[C>A]T	8
+A[C>G]A	19
+A[C>G]C	6
+A[C>G]G	8
+A[C>G]T	18
+A[C>T]A	17
+A[C>T]C	18
+A[C>T]G	30
+A[C>T]T	16
+A[T>A]A	5
+A[T>A]C	6
+A[T>A]G	8
+A[T>A]T	9
+A[T>C]A	18
+A[T>C]C	6
+A[T>C]G	13
+A[T>C]T	16
+A[T>G]A	5
+A[T>G]C	1
+A[T>G]G	5
+A[T>G]T	4
+C[C>A]A	14
+C[C>A]C	16
+C[C>A]G	7
+C[C>A]T	8
+C[C>G]A	22
+C[C>G]C	17
+C[C>G]G	19
+C[C>G]T	17
+C[C>T]A	32
+C[C>T]C	40
+C[C>T]G	44
+C[C>T]T	46
+C[T>A]A	4
+C[T>A]C	11
+C[T>A]G	8
+C[T>A]T	11
+C[T>C]A	15
+C[T>C]C	18
+C[T>C]G	18
+C[T>C]T	18
+C[T>G]A	2
+C[T>G]C	6
+C[T>G]G	6
+C[T>G]T	5
+G[C>A]A	15
+G[C>A]C	12
+G[C>A]G	6
+G[C>A]T	7
+G[C>G]A	13
+G[C>G]C	5
+G[C>G]G	5
+G[C>G]T	12
+G[C>T]A	22
+G[C>T]C	24
+G[C>T]G	35
+G[C>T]T	26
+G[T>A]A	2
+G[T>A]C	3
+G[T>A]G	5
+G[T>A]T	5
+G[T>C]A	6
+G[T>C]C	12
+G[T>C]G	10
+G[T>C]T	9
+G[T>G]A	4
+G[T>G]C	2
+G[T>G]G	8
+G[T>G]T	5
+T[C>A]A	23
+T[C>A]C	21
+T[C>A]G	8
+T[C>A]T	27
+T[C>G]A	103
+T[C>G]C	49
+T[C>G]G	22
+T[C>G]T	144
+T[C>T]A	107
+T[C>T]C	81
+T[C>T]G	45
+T[C>T]T	74
+T[T>A]A	5
+T[T>A]C	5
+T[T>A]G	2
+T[T>A]T	11
+T[T>C]A	14
+T[T>C]C	13
+T[T>C]G	7
+T[T>C]T	17
+T[T>G]A	3
+T[T>G]C	5
+T[T>G]G	6
+T[T>G]T	7