Update fleximod test and gitmodules file to match new CAM code/submodules.

Author: nusbaume

.github/workflows/fleximod_test.yaml

@@ -13,7 +13,7 @@ jobs:
         uses: actions/checkout@v4
       - id: run-fleximod
         run: |
-          $GITHUB_WORKSPACE/bin/git-fleximod update
+          $GITHUB_WORKSPACE/bin/git-fleximod update -o
           echo
           echo "Update complete, checking status"
           echo
@@ -23,6 +23,4 @@ jobs:
           echo
           echo "Checking if git fleximod matches expected externals"
           echo
-          git diff --exit-code
-        
-          
+          git add . && git diff --exit-code && git diff --cached --exit-code

.gitmodules

@@ -20,7 +20,7 @@
 [submodule "ncar-physics"]
         path          = src/physics/ncar_ccpp
 	url           = https://github.com/ESCOMP/atmospheric_physics
-	fxtag         = 178c1833d72a4027c6162a6c11b52bbbdcb272b6
+	fxtag         = atmos_phys0_17_002
         fxrequired    = AlwaysRequired
         fxDONOTUSEurl = https://github.com/ESCOMP/atmospheric_physics
 [submodule "rrtmgp-data"]
@@ -32,7 +32,7 @@
 [submodule "ccs_config"]
         path          = ccs_config
         url           = https://github.com/ESMCI/ccs_config_cesm.git
-        fxtag         = ccs_config_cesm1.0.59
+        fxtag         = ccs_config_cesm1.0.60
         fxrequired    = ToplevelRequired
         fxDONOTUSEurl = https://github.com/ESMCI/ccs_config_cesm.git
 [submodule "cdeps"]
@@ -50,7 +50,7 @@
 [submodule "cime"]
         path          = cime
         url           = https://github.com/ESMCI/cime
-        fxtag         = cime6.1.122
+        fxtag         = cime6.1.126
         fxrequired    = ToplevelRequired
 	fxDONOTUSEurl = https://github.com/ESMCI/cime
 [submodule "cism"]