Files are not updated correctly when using `pull.sh` script

[mximp]

When pulled changes include renaming of a file in the result of running pull.sh both files are kept in the folder.
The was not checked directly but only suspected based on #126 .

Need to confirm the hypothesis and fix the issue.

[yegor256]

@maxonfjvipon this may be closed, right?

[maxonfjvipon]

@yegor256 actually it still does not work correctly, I'll take it soon when I integrate eo2js here