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[BUG]error running plotpup.py

Status: Open.

#166 In open2c/coolpuppy;

· wangmhan opened on Apr 10, 2025

[Q]can plotpup.py show log2FC

Status: Open.

#165 In open2c/coolpuppy;

· BenxiaHu opened on Mar 16, 2025

Dividing pileups with multiple categories

Status: Open.

#163 In open2c/coolpuppy;

· rikrdo89 opened on Mar 4, 2025

Values &lt;1 for <code>rescale_flank</code> cause <code>assertion error</code> when including central pixel score

Status: Open.

#161 In open2c/coolpuppy;

· rikrdo89 opened on Mar 2, 2025

[Q] Centromere Trans Pileup

Status: Open.

#157 In open2c/coolpuppy;

· LucasMcNU opened on Oct 29, 2024

[Q] How to test significance of change between pileups?

Status: Open.

#148 In open2c/coolpuppy;

· AudreyBaguette opened on Jun 3, 2024

<code>pu.pileupsWithControl</code> might skip some pile-up regions or raise vague <code>domain_score not in dict2</code> AssertionError

Status: Open.

#146 In open2c/coolpuppy;

· nvaulin opened on May 25, 2024

To access a value by position, use <code>ser.iloc[pos]</code> chroffset = self.clr.offset(region[0])

Status: Open.

#144 In open2c/coolpuppy;

· jiangshan529 opened on Apr 15, 2024

[Q] Question on normalization between 2 conditions before coolpups

Status: Open.

#139 In open2c/coolpuppy;

· Lucas446 opened on Dec 9, 2023

plotpup.py TypeError: __init__() got an unexpected keyword argument 'add_all'

Status: Open.

#73 In open2c/coolpuppy;

· odovgusha opened on Jun 10, 2022